Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1588 |
Symbol | |
ID | 7399536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1608371 |
End bp | 1608994 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643708654 |
Product | hypothetical protein |
Protein accession | YP_002566244 |
Protein GI | 222480007 |
COG category | [S] Function unknown |
COG ID | [COG1901] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00408937 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCCAGT TCGTCGTCAT CGGCCACGAC GTGCCCACCG ATCCGGACGC GATCTCGCTG TCGGACATCC CCGGTGCGGG CCGGCTCGAC CTCCTCTGCC GGTGTGTCGC CGCCGGCGTG TTCCTCTCGC ACGGGATCCG CGAGCGCGTC CGAGTCCACC TCGTCGTCGC CGACGAGTTT ACGGTCACCT TCGACGCCGA CAGCCTCCGG CACCTCCACC CCGACGAGCG CAACGTCGCC GCGCGGATCC GGGACGCGCT CGACGCGCAG GACGACGCCA TCGGGCACAT GCCCGCCGAC GTTTCGCCCG GCGTCGAACT CCGGCGGATG GGACTGGAAG CGACCCTCGA CCGGGTGCTC GACACTCCCG GTACCTCCAG CGCGTCTGCC GACCCAACCC TTGTCCAGCT TCACGAGGAC GGCGATCCCC TCGTCGACGC CGCGCCGCCG ACCGACCCCG TGTTCGTGCT CTCCGACCAC AACGATTTCG CCCCCGCCGA GCGCGACCTG CTCGCGGACC GTGCGGAGCG CCGCGTACGC GTCGGTCCCG AGCTACTCCA TGCCGACCAC ACCGTCTCTG TCGTCCACAA CTGGCTCGAC ACCGATGGCT ACGAGTCCTA CTGA
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Protein sequence | MRQFVVIGHD VPTDPDAISL SDIPGAGRLD LLCRCVAAGV FLSHGIRERV RVHLVVADEF TVTFDADSLR HLHPDERNVA ARIRDALDAQ DDAIGHMPAD VSPGVELRRM GLEATLDRVL DTPGTSSASA DPTLVQLHED GDPLVDAAPP TDPVFVLSDH NDFAPAERDL LADRAERRVR VGPELLHADH TVSVVHNWLD TDGYESY
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