Gene Hlac_1588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1588 
Symbol 
ID7399536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1608371 
End bp1608994 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content70% 
IMG OID643708654 
Producthypothetical protein 
Protein accessionYP_002566244 
Protein GI222480007 
COG category[S] Function unknown 
COG ID[COG1901] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00408937 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCCAGT TCGTCGTCAT CGGCCACGAC GTGCCCACCG ATCCGGACGC GATCTCGCTG 
TCGGACATCC CCGGTGCGGG CCGGCTCGAC CTCCTCTGCC GGTGTGTCGC CGCCGGCGTG
TTCCTCTCGC ACGGGATCCG CGAGCGCGTC CGAGTCCACC TCGTCGTCGC CGACGAGTTT
ACGGTCACCT TCGACGCCGA CAGCCTCCGG CACCTCCACC CCGACGAGCG CAACGTCGCC
GCGCGGATCC GGGACGCGCT CGACGCGCAG GACGACGCCA TCGGGCACAT GCCCGCCGAC
GTTTCGCCCG GCGTCGAACT CCGGCGGATG GGACTGGAAG CGACCCTCGA CCGGGTGCTC
GACACTCCCG GTACCTCCAG CGCGTCTGCC GACCCAACCC TTGTCCAGCT TCACGAGGAC
GGCGATCCCC TCGTCGACGC CGCGCCGCCG ACCGACCCCG TGTTCGTGCT CTCCGACCAC
AACGATTTCG CCCCCGCCGA GCGCGACCTG CTCGCGGACC GTGCGGAGCG CCGCGTACGC
GTCGGTCCCG AGCTACTCCA TGCCGACCAC ACCGTCTCTG TCGTCCACAA CTGGCTCGAC
ACCGATGGCT ACGAGTCCTA CTGA
 
Protein sequence
MRQFVVIGHD VPTDPDAISL SDIPGAGRLD LLCRCVAAGV FLSHGIRERV RVHLVVADEF 
TVTFDADSLR HLHPDERNVA ARIRDALDAQ DDAIGHMPAD VSPGVELRRM GLEATLDRVL
DTPGTSSASA DPTLVQLHED GDPLVDAAPP TDPVFVLSDH NDFAPAERDL LADRAERRVR
VGPELLHADH TVSVVHNWLD TDGYESY