Gene Hlac_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1572 
Symbol 
ID7401505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1590310 
End bp1590879 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content73% 
IMG OID643708638 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002566228 
Protein GI222479991 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGT ACTCGACGGG CGGTGGCGGC GGCGGCGACG ACGGCGACGC CTGCGAGCTC 
TGCGGGCGCG AGACCACAGA CCTCCAGCGG GCCACGGTCG CCGGGGCGAA GCTCCTCGTC
TGCTCGGACT GCCGCCCCCA CGACGACGCC GGCAACGCGC CCGGCGGGCG CGGCGGATCC
GGTGGGAGTC GGGGCGGAAG TTCCGGCGGA AGCCCCGGCG GCGCCAGCTC CGAGTCGACC
GGAACCGGGA CGGAGAGCCG GAAGAAGGAA ATCGCCCGCA AGCAGGCGAA GATGTACGAC
TCCGCGACCG GCGACTCCAA ACACTGGGAG GAAGGCGGCA CCAACTACGA GTCGGACCGG
CTCCCGTACC TCGTCTCCGG CTACGGCGAC GACGTGGCGG CGGCCCGGCA AGACGCCGGA
CTCACGGTCG AGGAGCTGGC CGAGGAGCTC GACGTCGACG AGGACGACCT GTTCGCTGTC
GAGGACGGTC GGGCCGCGAC CGCCGGCGTC GGCGGCTCCG TCGTCCGCGC GCTCGAAGAG
CGGCTCGGCG TCGATATCGT CGACGAGTGA
 
Protein sequence
MAKYSTGGGG GGDDGDACEL CGRETTDLQR ATVAGAKLLV CSDCRPHDDA GNAPGGRGGS 
GGSRGGSSGG SPGGASSEST GTGTESRKKE IARKQAKMYD SATGDSKHWE EGGTNYESDR
LPYLVSGYGD DVAAARQDAG LTVEELAEEL DVDEDDLFAV EDGRAATAGV GGSVVRALEE
RLGVDIVDE