Gene Hlac_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1570 
Symbol 
ID7401503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1588672 
End bp1589076 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content67% 
IMG OID643708637 
ProductUspA domain protein 
Protein accessionYP_002566227 
Protein GI222479990 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGATG TACTCATCGG GATCGACAAC GCGGAGGATA GCCGTGCGAT CGCGCAGGCG 
GAGGCGATCG TGGATCTCCC GACGGTGGAT GGCGCGGTGA CCGCTCACCT GTGTCACGTG
TTCCAGGAGA ACCCCGAGGG GGCCTCAGTC CACCAGATAT CGGCGGTCCG ACGCGCCCGC
GAGACCCTCG AAGAAGCCGG CATCAACTGC GTCCACTACG AGGCAAGCGG CGACCCCACA
GACGAACTGC TCGCGGCCGC GGACGACATC GACGCGGACG CAATCTGCGT CTCCGGCCGC
AAGCGACGCC CGACCGGGAA GGCCGTCTTC GGGAGCGTGA CGCAGGACGT GATCTTGGGT
GCCGATCGTC CGATCTTCGC GGTCCCGGCG CCGCGAAGCG ACTGA
 
Protein sequence
MYDVLIGIDN AEDSRAIAQA EAIVDLPTVD GAVTAHLCHV FQENPEGASV HQISAVRRAR 
ETLEEAGINC VHYEASGDPT DELLAAADDI DADAICVSGR KRRPTGKAVF GSVTQDVILG
ADRPIFAVPA PRSD