| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1568 |
|---|
| Symbol | |
|---|
| ID | 7401501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1586171 |
|---|
| End bp | 1587235 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643708635 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_002566225 |
|---|
| Protein GI | 222479988 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTTG AAGGGACCGT TCTGGTCGGT CCGGAGTTCG AGCCGGTCGA AGGCCGGGTC
ATCGTCGCCG ACGACGAGAT CGTCCGGATC GAGGAGACGA GCGTCGACTC CGACGACGTG
ATCCTCCCGG CGTTCGTCAA CGCCCACACC CACATCGGTG ACTCCATCGC CAAGGAGGCC
GGCGAGGGCC TCTCGCTCGA CGAGCTGGTC GCACCGCCGG ACGGGCTCAA ACACCGCCTC
CTGCGGGAGG CGAGCCACGA GGCGAAAGTC GCCGCGATGG CGCGGAGCCT CCGGTACATG
GAGTCGACCG GGACCGGCAC GTTCCTGGAG TTCCGCGAGG GCGGCGTCAA GGGCGTGGCC
GCGCTCCGGG ACGCGGTCGC GGGCGAGGGC GTCGACTTCG GCGAGCGCGC GATCGATCCG
GTCGTGTTCG GTCGTGACGA CCCCGACGTG CTCTCGGTCG CTGACGGGTA CGGCGCCTCC
GGTGCCCGCG ACGCCGACTT CGACGCGGTG CGCTCGGAGA CTCGCGAGGC GGGCAAGCTG
TTCGGGATCC ACGCCGGCGA GCGCGACGCC GACGACATCA ACGCCGCGAT GGATCTCGAC
CCCGACTTTC TCGTCCACAT GGTCCACGCC GAGCCGATCC ACCTCGAGCG GCTCGCCGAC
CGCGGGACGC CCGTGGCCGT CTGCCCCCGG TCGAATCTCG TGACGAACGT CGGCGTGCCG
CCGATCCGCG ACCTCGCCGA GCGGACGACG GTCGCGCTCG GCACCGACAA CGTCATGCTC
GACTCGCCGT CGATGTTCCG CGAGATGGAG TTCGCCGCGA AGCTCTCCGA TCTCCCGGCC
CGAGAGATCC TGCGGATGGC GACGGTGAAC GGCGCGGCGA TCGCGGGGCT GAACCGCGGC
GTGATCGAGC TGGGCGCGGA TGCCGATCTG TTGGTGCTCG ACGGCGACTC CGACAACCTT
GCCGGCGCGC ACGACCTCGT TCGCGCGATC GTCAGGCGCG CCGGCGCGGC CGACGTGTCT
CGGGTCGTAA TCGGCGGCGA GCCGGCCGGG AGAGAAACGG TTTAG
|
|---|
| Protein sequence | MHLEGTVLVG PEFEPVEGRV IVADDEIVRI EETSVDSDDV ILPAFVNAHT HIGDSIAKEA
GEGLSLDELV APPDGLKHRL LREASHEAKV AAMARSLRYM ESTGTGTFLE FREGGVKGVA
ALRDAVAGEG VDFGERAIDP VVFGRDDPDV LSVADGYGAS GARDADFDAV RSETREAGKL
FGIHAGERDA DDINAAMDLD PDFLVHMVHA EPIHLERLAD RGTPVAVCPR SNLVTNVGVP
PIRDLAERTT VALGTDNVML DSPSMFREME FAAKLSDLPA REILRMATVN GAAIAGLNRG
VIELGADADL LVLDGDSDNL AGAHDLVRAI VRRAGAADVS RVVIGGEPAG RETV
|
|---|
| |