Gene Hlac_1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1567 
Symbol 
ID7401500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1585457 
End bp1586146 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID643708634 
Productthymidine kinase 
Protein accessionYP_002566224 
Protein GI222479987 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCGA TCACTCGATC CGGCTGGATC GAGGTCATTT CTGGATCGAT GTTCTCGGGG 
AAAACAGAGG AGCTGCTCCG GCGGCTCCGG CGCTCTGAGA TCGCCGGCCA ATCCGTCGCG
GTGTACAAGC CGGCCGTTGA CGACCGCTAC GGCGAGACGA CGATCGGGAG CCATAACGGC
CGGCAGTGGG AGGCGACCGT CGTCGACAAC GAGGGTGGCG GCCCGCTTGC AATCCTCGAC
GACGAGCCGT TCCCCGAGGT CGTCGCGATC GACGAGGCGA ATTTCTTCTC GGACGCGCTG
GTGGAGGTGT GTAACGCCTT AGCGGACAAC GGCACCCGCG TGATCGTCTC CGGCACCGAT
CAGACGTTCC GCGGCGAGCC GTTCGAACCC CTGCCGGAGC TGATGGCGAC CGCCGAGTAC
GTCGACAAGC TACAAGCGAT CTGCTCGCAG TGCGGCGAGC CCGCCTCCCG GAACCAGCGC
CTCATCGAGG GGGAGCCGGC CCACGTCGAC GATCCGACGA TCCTCGTCGG CGCCGAGGAG
TCCTACGAGG CGCGGTGTCG TGACTGCCAC GTGTTGCGGA CCGGCGAGCG CTCGGAGGCC
GATCGAGCGT ATCTGAACGG TGAAAGAGTC GCCGAGAATG GCTCCGAAAA GCAAGAAGAG
CCGATAGACT CCGGCGCGAC CGACGACTGA
 
Protein sequence
MHAITRSGWI EVISGSMFSG KTEELLRRLR RSEIAGQSVA VYKPAVDDRY GETTIGSHNG 
RQWEATVVDN EGGGPLAILD DEPFPEVVAI DEANFFSDAL VEVCNALADN GTRVIVSGTD
QTFRGEPFEP LPELMATAEY VDKLQAICSQ CGEPASRNQR LIEGEPAHVD DPTILVGAEE
SYEARCRDCH VLRTGERSEA DRAYLNGERV AENGSEKQEE PIDSGATDD