Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1557 |
Symbol | |
ID | 7401489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1578312 |
End bp | 1579007 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643708623 |
Product | uridine kinase |
Protein accession | YP_002566214 |
Protein GI | 222479977 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0572] Uridine kinase |
TIGRFAM ID | [TIGR00235] uridine kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTC CCTCGTTCGT GATCGGGATC GCGGGGGGAA GTGGCGCGGG GAAGACGACC GTCTCCCGGC TCGTCACCCG CGACCTCGGC GACAGCGTCA CCCGCATCCC GCTCGACAAC TACTACGAGG ACCTCTCGCA CCTCGACTTC GAAGAGCGCC AATCGGTCAA CTACGACCAC CCCTCGGCGT TCGAGTGGGA ACTGCTCAGA GAGCACCTCG AAGCCCTGCT CGAAGGCCAG TCGGTGCAGA TGCCGCAGTA CGACTTCGAG ATCCACAACC GGAAGGAGGA GCGTATCCTG GTCGAGCCGA CCGACGTCAT CGTGCTCGAA GGAATCCTAG CGCTGTACGA CGAGGAAATA AACGCCATGA TGGACCTCCG ACTGTTCGTC GAGACCGACG CCGACGTCCG AATTTTACGC CGGATCCGCC GAGACGTGAT CGACCGCGGC CGCGACTTGG AGGGCGTCAT CGACCAGTAC CTCTCGACGG TGAAGCCGAT GCACGAGCAG TTCATCGAAC CCTCGAAGAA ACACGCCGAC GTGATCATCC CGGAGGGCGC CAACAGCGTC GCGGTGAACC TCTTAGAGGA GAAGCTCCGT GCCGAGGTCG AGGGCGACGC CGTCCGGAGC TGGGAGCGCG GCAGTTTGGA GGAGGAACTC GGCGAGAAGC GCTCGCTCGA CATGGACGAC GACTGA
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Protein sequence | MTIPSFVIGI AGGSGAGKTT VSRLVTRDLG DSVTRIPLDN YYEDLSHLDF EERQSVNYDH PSAFEWELLR EHLEALLEGQ SVQMPQYDFE IHNRKEERIL VEPTDVIVLE GILALYDEEI NAMMDLRLFV ETDADVRILR RIRRDVIDRG RDLEGVIDQY LSTVKPMHEQ FIEPSKKHAD VIIPEGANSV AVNLLEEKLR AEVEGDAVRS WERGSLEEEL GEKRSLDMDD D
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