Gene Hlac_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1557 
Symbol 
ID7401489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1578312 
End bp1579007 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content63% 
IMG OID643708623 
Producturidine kinase 
Protein accessionYP_002566214 
Protein GI222479977 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC CCTCGTTCGT GATCGGGATC GCGGGGGGAA GTGGCGCGGG GAAGACGACC 
GTCTCCCGGC TCGTCACCCG CGACCTCGGC GACAGCGTCA CCCGCATCCC GCTCGACAAC
TACTACGAGG ACCTCTCGCA CCTCGACTTC GAAGAGCGCC AATCGGTCAA CTACGACCAC
CCCTCGGCGT TCGAGTGGGA ACTGCTCAGA GAGCACCTCG AAGCCCTGCT CGAAGGCCAG
TCGGTGCAGA TGCCGCAGTA CGACTTCGAG ATCCACAACC GGAAGGAGGA GCGTATCCTG
GTCGAGCCGA CCGACGTCAT CGTGCTCGAA GGAATCCTAG CGCTGTACGA CGAGGAAATA
AACGCCATGA TGGACCTCCG ACTGTTCGTC GAGACCGACG CCGACGTCCG AATTTTACGC
CGGATCCGCC GAGACGTGAT CGACCGCGGC CGCGACTTGG AGGGCGTCAT CGACCAGTAC
CTCTCGACGG TGAAGCCGAT GCACGAGCAG TTCATCGAAC CCTCGAAGAA ACACGCCGAC
GTGATCATCC CGGAGGGCGC CAACAGCGTC GCGGTGAACC TCTTAGAGGA GAAGCTCCGT
GCCGAGGTCG AGGGCGACGC CGTCCGGAGC TGGGAGCGCG GCAGTTTGGA GGAGGAACTC
GGCGAGAAGC GCTCGCTCGA CATGGACGAC GACTGA
 
Protein sequence
MTIPSFVIGI AGGSGAGKTT VSRLVTRDLG DSVTRIPLDN YYEDLSHLDF EERQSVNYDH 
PSAFEWELLR EHLEALLEGQ SVQMPQYDFE IHNRKEERIL VEPTDVIVLE GILALYDEEI
NAMMDLRLFV ETDADVRILR RIRRDVIDRG RDLEGVIDQY LSTVKPMHEQ FIEPSKKHAD
VIIPEGANSV AVNLLEEKLR AEVEGDAVRS WERGSLEEEL GEKRSLDMDD D