| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1529 |
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| Symbol | |
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| ID | 7401459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1548376 |
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| End bp | 1550040 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643708595 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002566187 |
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| Protein GI | 222479950 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.130898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.344827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGACG AGCCCTCCGA GGACCCGCCG GAGTCGCCTT CGGAATTCGG CGGTACCGGC
CCCGGTTCCG CCGACGATGA TGCCGGTGAC GGCGGTGGCG ACAATGACAG CGGACCGATC
GACGAGACGA ACAGTGGCGT CGCCGGAGAC GCTTCCGACG ACCGAGTGTC GGACAAGTCG
ATCACCGAGG GCAGCCTGAT CCGACCGCTG TTCCATCTCG CGTGGCCGAT CGTCGTCATC
CAACTGTTAC AGGTGATGTA CAACGTCGTC GACACGCTGT ACCTCGGGCG ACTGTCGGCC
GAGGCGGTCG GCGCGATCAG CCTCGCATTC CCCCTGATCT TCCTGCTCAT CGCGGTTGCC
GGTGGCTTCA CGACCGCGGG CGCGATCCTC GTCGCGCAGT ACACCGGCGC CGACGGGGAC
GGGTCCGCGG GGCTCGTCGC CGGCCAGACT ATCTTCAGTG TCGCCGTACT CTCGGTACTC
ATCGGGGTCG GCGGATACTT CTACACGCGC CCGGCGCTCG AGATCCTGCC GAGCGACCCC
GATACGGCGG CGACGGTGAT CCCGCTCGCG GCCGATTACA TGGAGGTCAT CTTCGCCGGC
ATCCCGCTGA TGTTCGGGTT CTTCGTCTTC TCCGCGCTGA TGCGCGGGTA CGGTGACACT
CGAACGCCGA TGGCGGTGAT GGTCGTCTCG GTGTTCCTGA ACGTGCTGCT CGACCCGTTC
CTCATCTTCG GGTTTTCGGC GAACCCCTTG TTCGGCTGGC TGGCGGCGGT GCCGCTCGTC
GCGGCGCTCG ATCCCGTCGG CCTTCAGGAG GCCCTGTTCG CGGCCACCGG GTTCACCGGA
TTCGGAATTG AGGGTGCCGC AATGGCGACG ATATTCTCTC GGGGGGTCGC CACCGCGATC
GGCCTCTGGC TGCTGTTCGC CACGGGGCTC GGGCCGGCTG TCTCCCTGAG CCATCTCCGC
CCGGATCGCG GGTTCATTGA GGACATCTTC CGGCTGGGGC TTCCCTCCAG CGTCGAGCAG
ACGACCAGCG CGCTCGCGAT GATCACCCTC ACGGCGATGG TGGTCACGTT CTCACCCCCG
GTAGTAGCTG CCTACGGCCT CGGAAACCGG CTCATCTCGC TCGTCTTCCT CCCCGCGATG
GGGCTCGGAC GCGCGATCGA CACGATGGTG GGACAGAACC TCGGTGCGAA CCGGGCAGAC
CGCGCTGCGC GCTCGGTCAA GCTCGCGGCG TCGACCGGAG CCGGAGTGAT GTTCCTCGTC
GCGATCGTCG CTGTGACGTT CACGGAGCCG ATCGTCGGCG TCTTCCTTGG CGACGTGCCC
GACGCGCCCG CGACCATCGC GTCCGCGGTC GAGTACGTGC AGATTCGGTC CGTCGAGTTC
GCCTTCATCG GGGTCTCGCA GGTGATCCTC GGGGCGTTCC GCGGGGCCGG CAACACCAAG
ACCGCGATGA TGATCTCGAT TCTTACACTC TGGGTCGGAC GAGTCGCCAG CGTGGCCTAC
CTCGTCTTCG TCGCTGGCTG GGGCGAGACG GGGATCTGGG TGGGGATGGC ACTCGGGAAC
ATCTTGGGCG CGACCGTCGC CGTTGCGTGG TTCGCGCGCG GGACGTGGAC GGAACGATAT
ATCGACGATC CGGCACCGGG CGTGGATCCC GCGGTCGACG ACTGA
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| Protein sequence | MSDEPSEDPP ESPSEFGGTG PGSADDDAGD GGGDNDSGPI DETNSGVAGD ASDDRVSDKS
ITEGSLIRPL FHLAWPIVVI QLLQVMYNVV DTLYLGRLSA EAVGAISLAF PLIFLLIAVA
GGFTTAGAIL VAQYTGADGD GSAGLVAGQT IFSVAVLSVL IGVGGYFYTR PALEILPSDP
DTAATVIPLA ADYMEVIFAG IPLMFGFFVF SALMRGYGDT RTPMAVMVVS VFLNVLLDPF
LIFGFSANPL FGWLAAVPLV AALDPVGLQE ALFAATGFTG FGIEGAAMAT IFSRGVATAI
GLWLLFATGL GPAVSLSHLR PDRGFIEDIF RLGLPSSVEQ TTSALAMITL TAMVVTFSPP
VVAAYGLGNR LISLVFLPAM GLGRAIDTMV GQNLGANRAD RAARSVKLAA STGAGVMFLV
AIVAVTFTEP IVGVFLGDVP DAPATIASAV EYVQIRSVEF AFIGVSQVIL GAFRGAGNTK
TAMMISILTL WVGRVASVAY LVFVAGWGET GIWVGMALGN ILGATVAVAW FARGTWTERY
IDDPAPGVDP AVDD
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