Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1523 |
Symbol | |
ID | 7401453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1540835 |
End bp | 1541395 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643708589 |
Product | transcription factor |
Protein accession | YP_002566181 |
Protein GI | 222479944 |
COG category | [K] Transcription |
COG ID | [COG2101] TATA-box binding protein (TBP), component of TFIID and TFIIIB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.302764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0166402 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAACC CTGCAGATTC GATCGAGATC CAGAACGTAG TTGCATCGAC GGGGATCGGC CAAGAGCTCG ATTTGGAGGC GCTCGCCGAG GACCTTCCGG GCGCTGATTT CAACCCCGAC AACTTCCCGG GGCTCGTCTA CCGGACCCAG GAACCGAAGG CGGCCGCGCT CATTTTCCGG TCAGGGAAGA TCGTCTGCAC GGGTGCGAAA AGCATCGATG ACGTTCACGA GGCGCTCGGG ATCATCTTCG AGAAACTCCG CGGACTGCAG ATTCCCGTCG AAGAGGACCC GGAAATCACC GTTCAGAACA TCGTCTCGAG CGCCGACCTC GGGCACAACC TTAACCTCAA CGCGCTCGCG ATCGGGCTTG GACTCGAAGA CGTCGAGTAC GAGCCGGAGC AGTTCCCGGG TCTCGTGTAC CGGATGGACG AACCGGAAGT CGTGATTCTC CTGTTTGGGA GTGGGAAGAT CGTCATCACC GGTGGGAAGC GGACCGACGA CGCGGAAGAA GCCGTAGAGG AGATCGTCGA ACGGATCGAA GGGCTCGGCC TACTAGGATA G
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Protein sequence | MTNPADSIEI QNVVASTGIG QELDLEALAE DLPGADFNPD NFPGLVYRTQ EPKAAALIFR SGKIVCTGAK SIDDVHEALG IIFEKLRGLQ IPVEEDPEIT VQNIVSSADL GHNLNLNALA IGLGLEDVEY EPEQFPGLVY RMDEPEVVIL LFGSGKIVIT GGKRTDDAEE AVEEIVERIE GLGLLG
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