Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1520 |
Symbol | |
ID | 7401446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1532512 |
End bp | 1533399 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643708582 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_002566178 |
Protein GI | 222479941 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00453579 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCGACGA ATCTGCGCGT CTCACCGGCG GTCGGGCTTG TGATTGCGGT GACCGCTGTG AGCGGGGGGG CGATTCTCGT CCGCCTCAGT GACGCGCCGA GTTCGGTCGC CGCATTCTAT CGGGTGCTGT TTACAACGCT CCCGCTGGTC CCCGTCGCAC TCTGGCGCTA TCGGACACAG CTCGCCGGCA TCACTCGCCA AGACCTCATA TTCGCGACGC TCTCAGGGAT CGCGCTCGCG CTGCACTTCG CTGCGTGGTT CGAGAGCCTC AACTGGACGA GCGTCGCTGC GAGCGTCACG CTTGTTCAGG CGCAGCCGGT GTTCGTGGCG CTCGGGGCGT GGCTCCTGTT GCGCGAGCGC GTGACGTCTC GGATGACCGT GGGCATCGCG GTGGCTGTCG CCGGAATGAT GGCGATGTCG CTCGGCGATC TCCTTGGCGG CGTGCTGGTC GGACCGCGAC CGATCTACGG GAACGGACTG GCACTGTTCG GCGCCATCAT GGCCGCTGGA TACGTGCTCG CTGGACGATC GATTCGCCAG CGGGTCGCGC TGATCCCCTA CGTGGTGGTC GTGTACGGTG TCTGTACCCT CTCACTCCTC GCGATCGTTC TCGCGGAGGG GCACGCATTA ACCGGGTATC CGCCGAGCGA ATGGGCGATC TTTGTCGGCC TCGCCGTCGG ACCGGGGCTG TTGGGTCACA CCGTGCTCAA CTGGGCGCTC GCGCACCTCA AATCGAGCGT CGTATCGGTG TCGTTGCTCG GCGAACCGGT CGGGGCAACG ATTCTCGCGT TCGTGTTCCT CGCGGAGGCT CCCACGGCGT TCACGCTCGC CGGTGGCGCC GTCGTTCTCG GTGGTATTGG TCTCACCGCA ACCGAAAGCA GAGCGTGA
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Protein sequence | MSTNLRVSPA VGLVIAVTAV SGGAILVRLS DAPSSVAAFY RVLFTTLPLV PVALWRYRTQ LAGITRQDLI FATLSGIALA LHFAAWFESL NWTSVAASVT LVQAQPVFVA LGAWLLLRER VTSRMTVGIA VAVAGMMAMS LGDLLGGVLV GPRPIYGNGL ALFGAIMAAG YVLAGRSIRQ RVALIPYVVV VYGVCTLSLL AIVLAEGHAL TGYPPSEWAI FVGLAVGPGL LGHTVLNWAL AHLKSSVVSV SLLGEPVGAT ILAFVFLAEA PTAFTLAGGA VVLGGIGLTA TESRA
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