Gene Hlac_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1519 
Symbol 
ID7401445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1530773 
End bp1532290 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content62% 
IMG OID643708581 
Producthistidine kinase 
Protein accessionYP_002566177 
Protein GI222479940 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0112832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTGG AGGCGACCGA AGACACCGAT CTGCAGCCGC TGGCTGACGC CTGTGGTATC 
GTCACAACTA CCGAGGCGGC AACAGATATA TCGATCGCTG ACCGACTCGC GGCGACGCCT
AAGAGCGTCC CCGTCCCCGT CATCGTCGTT CTCGAGACAG CGACCGCTGA GTCGTTTCGT
ATCGCGCTTC GAGTCGGTGC AGACGACGTG GTCACCGAGC CGATCTCGGA GACAACCGAA
CCGGGCTCTG ACACGGATCC ACTCGTCGAG CGACTACTCG ACGCGGTGGA GCCGAGACGG
ATTCAGTTCG GCTCGGACGA CGCCGAACAG CTCCGCGAGG TTCTGTTAGA CTCGGGATCG
ACGCTGATGA GTACGCGGTC AGACGAGGTC GACACGAAGA TCTGTTGGAC CATGGAGAAC
GTCGGTGAAC ACGCCGAACT CAACCGAATC GTTTGTTATC TCCGAGAGGG AGAGACGTTC
GACCCAGCGT ACGTCTGGTG TCCCGAAAGG TGCGACACCG AATCACACTC CCTCGATGGA
TTCCCAGACG CCGATCGACT TTCGATGTTC GAGAATGTGG TCCGGCCGTC GGTTCCGCCG
GAACTGGCGG ACCACTCTGT GGACGAGAGC GGTGCCTCCG GCGAAGAGGA GAGCTATCCG
ACGGCGACTG TCCACGTCCC GCTCGTCGCC GACTGGAATT TGGTCGGCGT GTTGTCCTTC
GAAACTGATA CGTGGCGTGC GTGGACCGAT GAGGAGGTGG ATCTCTACCG AACGTTCGCC
GATCTGATCG CGCACACCAT CGCGCGCAAC GACCGACGGC TGGAACTCCG TCGCCGAACG
GAACAGCTCG AGCAGTTCAG CGCGGTCGTT TCACACGACC TTAGGAATCC ACTCAACGTG
CTTTCAGGAT ATCTAGATCT GGTCGAAAAC GAGATCTCGC TATCGACATA TGAGCCGATG
GATCGGGCGG TGACGCGGAT GGAAGCGCTC ATCGACAACC TCCTTATGTT GGCGAAACGC
GGGGACACGA TCGGAAAAAC CGAATCAACC TCGGTGGCCG GCGTCGTCGA GGAGGCTTGG
CAGGCGGTCC GCGCGCCCGA CGCGACCCTG ACGCTTACCG ACGAGATTGG TCGGGTGCGT
GCCGATCCCA CCCGGCTCCA GCAGATGCTC GAGAATCTCT TCCGGAACAG CGTGGAGCAC
GCCTCCACTG GCAGCCGGGC GAAGCCCGGC GACGCCGTCG ACCACGCCGG CCCGAGCGTC
GCGATCGAGA TCGGCCCTCG AACCGACGGT GCCGACGGCG GGGGGATGTA TATCGCTGAC
GACGGGCCAG GCATTCCCTC CGACGTACGC GGTTCGCTTT TCGACTCTGG GTTTTCGACC
GCTGACAGTT CGGGTATCGG ACTCGCCATC GTCGACCGCA TCGTCGACGC ACACGGCTGG
GAGGTCGATG TCCACAACGA CAGCGGGGCA GTGTTCGAGG TCTCCTTCGA GGCGGAGACC
GCGGTGAATC CCGTGTGA
 
Protein sequence
MLLEATEDTD LQPLADACGI VTTTEAATDI SIADRLAATP KSVPVPVIVV LETATAESFR 
IALRVGADDV VTEPISETTE PGSDTDPLVE RLLDAVEPRR IQFGSDDAEQ LREVLLDSGS
TLMSTRSDEV DTKICWTMEN VGEHAELNRI VCYLREGETF DPAYVWCPER CDTESHSLDG
FPDADRLSMF ENVVRPSVPP ELADHSVDES GASGEEESYP TATVHVPLVA DWNLVGVLSF
ETDTWRAWTD EEVDLYRTFA DLIAHTIARN DRRLELRRRT EQLEQFSAVV SHDLRNPLNV
LSGYLDLVEN EISLSTYEPM DRAVTRMEAL IDNLLMLAKR GDTIGKTEST SVAGVVEEAW
QAVRAPDATL TLTDEIGRVR ADPTRLQQML ENLFRNSVEH ASTGSRAKPG DAVDHAGPSV
AIEIGPRTDG ADGGGMYIAD DGPGIPSDVR GSLFDSGFST ADSSGIGLAI VDRIVDAHGW
EVDVHNDSGA VFEVSFEAET AVNPV