Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1519 |
Symbol | |
ID | 7401445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1530773 |
End bp | 1532290 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643708581 |
Product | histidine kinase |
Protein accession | YP_002566177 |
Protein GI | 222479940 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0112832 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCTGG AGGCGACCGA AGACACCGAT CTGCAGCCGC TGGCTGACGC CTGTGGTATC GTCACAACTA CCGAGGCGGC AACAGATATA TCGATCGCTG ACCGACTCGC GGCGACGCCT AAGAGCGTCC CCGTCCCCGT CATCGTCGTT CTCGAGACAG CGACCGCTGA GTCGTTTCGT ATCGCGCTTC GAGTCGGTGC AGACGACGTG GTCACCGAGC CGATCTCGGA GACAACCGAA CCGGGCTCTG ACACGGATCC ACTCGTCGAG CGACTACTCG ACGCGGTGGA GCCGAGACGG ATTCAGTTCG GCTCGGACGA CGCCGAACAG CTCCGCGAGG TTCTGTTAGA CTCGGGATCG ACGCTGATGA GTACGCGGTC AGACGAGGTC GACACGAAGA TCTGTTGGAC CATGGAGAAC GTCGGTGAAC ACGCCGAACT CAACCGAATC GTTTGTTATC TCCGAGAGGG AGAGACGTTC GACCCAGCGT ACGTCTGGTG TCCCGAAAGG TGCGACACCG AATCACACTC CCTCGATGGA TTCCCAGACG CCGATCGACT TTCGATGTTC GAGAATGTGG TCCGGCCGTC GGTTCCGCCG GAACTGGCGG ACCACTCTGT GGACGAGAGC GGTGCCTCCG GCGAAGAGGA GAGCTATCCG ACGGCGACTG TCCACGTCCC GCTCGTCGCC GACTGGAATT TGGTCGGCGT GTTGTCCTTC GAAACTGATA CGTGGCGTGC GTGGACCGAT GAGGAGGTGG ATCTCTACCG AACGTTCGCC GATCTGATCG CGCACACCAT CGCGCGCAAC GACCGACGGC TGGAACTCCG TCGCCGAACG GAACAGCTCG AGCAGTTCAG CGCGGTCGTT TCACACGACC TTAGGAATCC ACTCAACGTG CTTTCAGGAT ATCTAGATCT GGTCGAAAAC GAGATCTCGC TATCGACATA TGAGCCGATG GATCGGGCGG TGACGCGGAT GGAAGCGCTC ATCGACAACC TCCTTATGTT GGCGAAACGC GGGGACACGA TCGGAAAAAC CGAATCAACC TCGGTGGCCG GCGTCGTCGA GGAGGCTTGG CAGGCGGTCC GCGCGCCCGA CGCGACCCTG ACGCTTACCG ACGAGATTGG TCGGGTGCGT GCCGATCCCA CCCGGCTCCA GCAGATGCTC GAGAATCTCT TCCGGAACAG CGTGGAGCAC GCCTCCACTG GCAGCCGGGC GAAGCCCGGC GACGCCGTCG ACCACGCCGG CCCGAGCGTC GCGATCGAGA TCGGCCCTCG AACCGACGGT GCCGACGGCG GGGGGATGTA TATCGCTGAC GACGGGCCAG GCATTCCCTC CGACGTACGC GGTTCGCTTT TCGACTCTGG GTTTTCGACC GCTGACAGTT CGGGTATCGG ACTCGCCATC GTCGACCGCA TCGTCGACGC ACACGGCTGG GAGGTCGATG TCCACAACGA CAGCGGGGCA GTGTTCGAGG TCTCCTTCGA GGCGGAGACC GCGGTGAATC CCGTGTGA
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Protein sequence | MLLEATEDTD LQPLADACGI VTTTEAATDI SIADRLAATP KSVPVPVIVV LETATAESFR IALRVGADDV VTEPISETTE PGSDTDPLVE RLLDAVEPRR IQFGSDDAEQ LREVLLDSGS TLMSTRSDEV DTKICWTMEN VGEHAELNRI VCYLREGETF DPAYVWCPER CDTESHSLDG FPDADRLSMF ENVVRPSVPP ELADHSVDES GASGEEESYP TATVHVPLVA DWNLVGVLSF ETDTWRAWTD EEVDLYRTFA DLIAHTIARN DRRLELRRRT EQLEQFSAVV SHDLRNPLNV LSGYLDLVEN EISLSTYEPM DRAVTRMEAL IDNLLMLAKR GDTIGKTEST SVAGVVEEAW QAVRAPDATL TLTDEIGRVR ADPTRLQQML ENLFRNSVEH ASTGSRAKPG DAVDHAGPSV AIEIGPRTDG ADGGGMYIAD DGPGIPSDVR GSLFDSGFST ADSSGIGLAI VDRIVDAHGW EVDVHNDSGA VFEVSFEAET AVNPV
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