| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1513 |
|---|
| Symbol | |
|---|
| ID | 7401439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 1526720 |
|---|
| End bp | 1527721 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643708575 |
|---|
| Product | Zinc finger TFIIB-type domain protein |
|---|
| Protein accession | YP_002566171 |
|---|
| Protein GI | 222479934 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0202903 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGA CACACATACG CGGCTACAAC GGCGAGACGG AGCGAGACCG GAGCACAGAG
TCGACTGAAT CGACGGCTGA GGAGGCGGAA TCGACGGAAG AACGGACTAC GACTTGTCCG
GAATGCGAGG GCAACCTCAT AACCGACACG GAACACGGCG AGACGGTCTG TTCCGAGTGC
GGGCTCGTCG TCGAACAGGA CTCGGTCGAC CGCGGGCCGG AGTGGCGCGC CTTCGACTCC
AGCGAGCGCG ACAGCAAGTC CCGCGTGGGG GCCCCGACGA CGAACATGAT GCACGACAAG
GGGCTCTCGA CGAACATCGG CTGGCAGGAC AAAGACGCCT ACGGGAAGTC GTTGTCTAGT
CGTCAGCGCC AGCGGATGCA ACGGCTGCGC ACCTGGAACG AGCGGTTCCG CACTCGCGAC
TCCAAAGAGC GGAACCTCAA GCAGGCACTC GGCGAGATAG ACCGGATGGC CAGCGCGCTC
GGCCTCCCCG ACAACGTCCG CGAGACCGCC TCGGTCATCT ATCGTCGCGC ACTGAGCGAG
AATCTCCTGC CGGGGCGCTC CATTGAGGGC GTTGCAACCG CAGCGCTGTA CGCCGCCGCC
AGACAGGCGG GGAACCCGCG GAGTCTCGAC GAGATATCGG CGGTCTCTCG GGTCGACAAG
ATGGAGCTCA CCCGGACGTA CCGATACGTG ATCCGCGAGC TCAAACTGGA GATTCAGCCC
GCAGACCCCG GAAGCTACGT CCCCCGGTTC GTCTCGCGCC TCGGCCTCTC CGAGGAAACA
CAGCGGGTCG CCCGCGAACT GCTCGACAGT GCCAAACGCG CCGGGATCAC CAGCGGGAAA
TCGCCGGTCG GACTCGCAGC CTCTGCGGTG TACGCGGCTG CACTCCTCTC GAACGAGAAG
GTAACCCAGA GCCAGGTGTC GGAGGTTGCC GACATCTCCG AAGTTACCAT CCGGAACCGG
TACAAGGAAC TCCTCGATGC GAGTGAAGGA CTGACCGCCT AA
|
|---|
| Protein sequence | MTETHIRGYN GETERDRSTE STESTAEEAE STEERTTTCP ECEGNLITDT EHGETVCSEC
GLVVEQDSVD RGPEWRAFDS SERDSKSRVG APTTNMMHDK GLSTNIGWQD KDAYGKSLSS
RQRQRMQRLR TWNERFRTRD SKERNLKQAL GEIDRMASAL GLPDNVRETA SVIYRRALSE
NLLPGRSIEG VATAALYAAA RQAGNPRSLD EISAVSRVDK MELTRTYRYV IRELKLEIQP
ADPGSYVPRF VSRLGLSEET QRVARELLDS AKRAGITSGK SPVGLAASAV YAAALLSNEK
VTQSQVSEVA DISEVTIRNR YKELLDASEG LTA
|
|---|
| |