| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1508 |
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| Symbol | |
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| ID | 7400336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1521419 |
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| End bp | 1522324 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643708570 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002566166 |
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| Protein GI | 222479929 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0603757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTGGAG GGGTGGTAAC GACGACCAAC CCACTCGGCG CCTGGCCCGA CCTACTCGGC
TATCCGGCGG CCCTCGTCGT CGGGCGGGCA CTGCTCGTCG TCGCCGTGTT CGGAGTGTTG
TACGGATCGT ACTTCCTCTC CGTCCAGTTG TTAATGCGGT CCGAGAACAA GCGACGGGCG
TACAACACGC GGAACGTGTT ACGGCTCGCG TTCGGGTTCG TGGGGACGGT CGCGACGCTC
GCGGTGCTGA CGGAGAACTG GCTCGGGCTC CTCTTCTCGC TCGGAGTCAT CGGGTTCGCG
ATCACCTTTG CACTCCAGCA GCCGCTGCTA TCGCTCATCG CGTGGGTGTA CATCACCGTT
AAACAGCCGT ACGGCGTCGG CGACCGCGTC CGGATCGACG ACGCGAAAGG CGACGTGATC
GGCGTCGACT TCCTCGTGAC GACGCTGTGG GAGATCAACG GCGAGCTGGT GACGACGAAC
CAGCCGTCCG GACGGGTGGT GACGGTGCCG AACAGCGTCG TGCTCTCCTC GAACGTGGTC
AACTTCGGCG GAGGTGGCTC CCCGTACGTG TGGAACGAAG TCGCCGTGCA GGTCGCTTAC
GAGACTGATC TCGACTTCGC CCGGTCCGTG ATGGCCGAAG AAGCGACCGA CCTCCTTGGC
GAGGACATGG CCGCGGGGAT CGCGGCGTAC CGCGAGGCGC TTGCCGAGAC GCCGGTGGAG
CTCGAAGTGC ACGACGGGCC GACGGTGAAC GTGACGCAGG GCGAGTCGTG GGTGGAGCTC
CGCGTCCGGT ACCTCACTCA TCCGCGTCGG GGGCAACGCG TCAAGAATCG GCTGTACGAG
CGGATCCTCG CCCGGTTCAA CGAGAACCCC GACAGGGTGG CGTTCCCGGT GAGCCGGAGC
CGGTAG
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| Protein sequence | MAGGVVTTTN PLGAWPDLLG YPAALVVGRA LLVVAVFGVL YGSYFLSVQL LMRSENKRRA
YNTRNVLRLA FGFVGTVATL AVLTENWLGL LFSLGVIGFA ITFALQQPLL SLIAWVYITV
KQPYGVGDRV RIDDAKGDVI GVDFLVTTLW EINGELVTTN QPSGRVVTVP NSVVLSSNVV
NFGGGGSPYV WNEVAVQVAY ETDLDFARSV MAEEATDLLG EDMAAGIAAY REALAETPVE
LEVHDGPTVN VTQGESWVEL RVRYLTHPRR GQRVKNRLYE RILARFNENP DRVAFPVSRS
R
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