Gene Hlac_1498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1498 
Symbol 
ID7400326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1505910 
End bp1507058 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content66% 
IMG OID643708560 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002566156 
Protein GI222479919 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGC TCGACGACAG CATCGTTCCG GAGCGCGCGA GAGACGTGAA GAGGGAGGCC 
CGCGAGTTCG CCGACGAGTA CATCGCCCCG AACGCCGAGG CGTACTACGA CTCGGGCGAG
TACCCGTGGG AGGTACTGGA GGCGGGGATG GACGCCGGGC TCATCGCCCA GGACATCGGC
GAGGAATACG GTGGGAAGGG GTTCGACCTC GCACAGGTGC TCGCGATCGC GGAGGAGTTC
TACCGCGCCG ACGCCGGCAT CGCGCTCACG CTCCAGTTGG CGAGCTTCGG CTGCGAGATG
GTCGAGCAGT ACGGCACCGA CGAACAGAAG GAAGAGTACC TCCGACCGGT CGCGGAGAAC
GACCAGATTT CGGGGCTCGC CGTCTCTGAG CCGGAGACCG GCTCCGACCT CGCGGGGATG
ACGACGAAAG CCGAGAAGGT CGACGGCGGC TACGAGCTCA CCGGCGAGAA GTACTGGGTC
GGCAACGCGG TCGAGGCCGA CTGGCTCACC GTCTACGCCA AGACCGGCGA CAGCGAGGAC
CGCTACTCCA ACTACACGCT GTTCATCGTC GAAACCGATT CGGACGGCTA CGAGGCGGAG
CATATCCCGG AGAAGATGGG GATGCGCGCC TCCAAACAGG GCCACATCGT CTTCGAGGAC
TGCTTCGTCC CCGAGGAGAA CGTCGTCGGC AGCGAGGGCG GCGGCTTCTA CGTCCTCGCC
GACTTCTTCA ATCACGGCCG CGTCATCGTC GGCGGCCACG GGCTCGGGCT CGCCGCGGCC
GCCATCGAGG AGGCCGAGGA ATTCGTCCAC GGGCGCAACG CCTTCGGCCG CACCGTCAAC
GAGTTCCAGG CGGTCCAACA CACCCTCTCG GACATGCGAA TCGGCTTCGA GTCGGCTCGC
GCGCTCAACT GGCGCGCCTG CGAGAAGGTC GCGGACAACG ACAACGCGGG CTACTGGGCC
GCGCTGGCGA AGACCAAGTC GACCGAGGTC GCCACCGACT GCGCCGAGAA GGGGATGAAA
CTCCACGGCG GGCGCTCGAT CCTCACCGAC CGCCGGATCG CCCGCGTCTA CCGCGACGTG
CGCATCCCGG TGATCTACGA GGGCGCGAAC GACATCCAGC GGAACCTCAT CTATCGCCAG
TCGCGGTAA
 
Protein sequence
MDLLDDSIVP ERARDVKREA REFADEYIAP NAEAYYDSGE YPWEVLEAGM DAGLIAQDIG 
EEYGGKGFDL AQVLAIAEEF YRADAGIALT LQLASFGCEM VEQYGTDEQK EEYLRPVAEN
DQISGLAVSE PETGSDLAGM TTKAEKVDGG YELTGEKYWV GNAVEADWLT VYAKTGDSED
RYSNYTLFIV ETDSDGYEAE HIPEKMGMRA SKQGHIVFED CFVPEENVVG SEGGGFYVLA
DFFNHGRVIV GGHGLGLAAA AIEEAEEFVH GRNAFGRTVN EFQAVQHTLS DMRIGFESAR
ALNWRACEKV ADNDNAGYWA ALAKTKSTEV ATDCAEKGMK LHGGRSILTD RRIARVYRDV
RIPVIYEGAN DIQRNLIYRQ SR