Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1498 |
Symbol | |
ID | 7400326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1505910 |
End bp | 1507058 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643708560 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_002566156 |
Protein GI | 222479919 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGC TCGACGACAG CATCGTTCCG GAGCGCGCGA GAGACGTGAA GAGGGAGGCC CGCGAGTTCG CCGACGAGTA CATCGCCCCG AACGCCGAGG CGTACTACGA CTCGGGCGAG TACCCGTGGG AGGTACTGGA GGCGGGGATG GACGCCGGGC TCATCGCCCA GGACATCGGC GAGGAATACG GTGGGAAGGG GTTCGACCTC GCACAGGTGC TCGCGATCGC GGAGGAGTTC TACCGCGCCG ACGCCGGCAT CGCGCTCACG CTCCAGTTGG CGAGCTTCGG CTGCGAGATG GTCGAGCAGT ACGGCACCGA CGAACAGAAG GAAGAGTACC TCCGACCGGT CGCGGAGAAC GACCAGATTT CGGGGCTCGC CGTCTCTGAG CCGGAGACCG GCTCCGACCT CGCGGGGATG ACGACGAAAG CCGAGAAGGT CGACGGCGGC TACGAGCTCA CCGGCGAGAA GTACTGGGTC GGCAACGCGG TCGAGGCCGA CTGGCTCACC GTCTACGCCA AGACCGGCGA CAGCGAGGAC CGCTACTCCA ACTACACGCT GTTCATCGTC GAAACCGATT CGGACGGCTA CGAGGCGGAG CATATCCCGG AGAAGATGGG GATGCGCGCC TCCAAACAGG GCCACATCGT CTTCGAGGAC TGCTTCGTCC CCGAGGAGAA CGTCGTCGGC AGCGAGGGCG GCGGCTTCTA CGTCCTCGCC GACTTCTTCA ATCACGGCCG CGTCATCGTC GGCGGCCACG GGCTCGGGCT CGCCGCGGCC GCCATCGAGG AGGCCGAGGA ATTCGTCCAC GGGCGCAACG CCTTCGGCCG CACCGTCAAC GAGTTCCAGG CGGTCCAACA CACCCTCTCG GACATGCGAA TCGGCTTCGA GTCGGCTCGC GCGCTCAACT GGCGCGCCTG CGAGAAGGTC GCGGACAACG ACAACGCGGG CTACTGGGCC GCGCTGGCGA AGACCAAGTC GACCGAGGTC GCCACCGACT GCGCCGAGAA GGGGATGAAA CTCCACGGCG GGCGCTCGAT CCTCACCGAC CGCCGGATCG CCCGCGTCTA CCGCGACGTG CGCATCCCGG TGATCTACGA GGGCGCGAAC GACATCCAGC GGAACCTCAT CTATCGCCAG TCGCGGTAA
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Protein sequence | MDLLDDSIVP ERARDVKREA REFADEYIAP NAEAYYDSGE YPWEVLEAGM DAGLIAQDIG EEYGGKGFDL AQVLAIAEEF YRADAGIALT LQLASFGCEM VEQYGTDEQK EEYLRPVAEN DQISGLAVSE PETGSDLAGM TTKAEKVDGG YELTGEKYWV GNAVEADWLT VYAKTGDSED RYSNYTLFIV ETDSDGYEAE HIPEKMGMRA SKQGHIVFED CFVPEENVVG SEGGGFYVLA DFFNHGRVIV GGHGLGLAAA AIEEAEEFVH GRNAFGRTVN EFQAVQHTLS DMRIGFESAR ALNWRACEKV ADNDNAGYWA ALAKTKSTEV ATDCAEKGMK LHGGRSILTD RRIARVYRDV RIPVIYEGAN DIQRNLIYRQ SR
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