Gene Hlac_1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1494 
Symbol 
ID7400322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1501533 
End bp1502171 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content51% 
IMG OID643708556 
Producttransposase 
Protein accessionYP_002566152 
Protein GI222479915 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.913135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.873536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAT TCGACCGCCT CAGCGAAGGT ATCGCGTGGA TTGACTTGTC GTTTGTGGAG 
CGAGATCGAA CGCCGCGCTG GGCGATTGAA GTAGGGATCC GCTGTCACTT AGCCGGTATG
TCACTGAGAG AGGTAAGTAA GCATCTCGAA AGATTTGGGG TTGATCGGAG TCATGTCGCT
ATTCACAACT GGGTTCATAA AGCCGATCTA CAACCGATCT CGACGGTTTC TGCGGATCAA
CTCGCGGTTG ATGAAAAGAT GATCCGCCTC CACGGCCAGC AGTTCTGGCT GTACGGCGCG
GTTGATCCAT ATACCAACGA AATCCTTCAT GTGAGCCTCT ATCCGACCAC AACGAAACAG
ACGACGCGAT GGTTTCTGAC CGATCTACAC CAGCGATACA GGCTCAATGA CGTGGAATTT
CTCGTCGATG ACGCAGACTA TCTTGGACCA GTCCTCGCTG AAGATGGCTA TCGATTCCGA
GTGATTCGGC ATGGAAATCG GAATGCTATC GAACGTGTCT TTTGGGAAAT AGAACGTCGA
ACATCATCGT TTGCGAATAG TTTCAGCAAT GTCGCGCTTG AGACAGCTCA AAATTGGCTC
GAAGCCTTCG CCGTCTACCA CAATTCACGC CAAACTTAA
 
Protein sequence
MAEFDRLSEG IAWIDLSFVE RDRTPRWAIE VGIRCHLAGM SLREVSKHLE RFGVDRSHVA 
IHNWVHKADL QPISTVSADQ LAVDEKMIRL HGQQFWLYGA VDPYTNEILH VSLYPTTTKQ
TTRWFLTDLH QRYRLNDVEF LVDDADYLGP VLAEDGYRFR VIRHGNRNAI ERVFWEIERR
TSSFANSFSN VALETAQNWL EAFAVYHNSR QT