| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1476 |
|---|
| Symbol | |
|---|
| ID | 7400304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1483419 |
|---|
| End bp | 1484114 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643708538 |
|---|
| Product | halocyanin domain protein |
|---|
| Protein accession | YP_002566134 |
|---|
| Protein GI | 222479897 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3794] Plastocyanin |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03102] halocyanin domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCCA ACGCCGACGA GACGACGATG AGTCGCCGCG GATTGTTCAG GGTCGGCGCA
GCGGGCGCCG CCGCCGCGAC CGGCCTCGCC GCCGGCTCCG GCGGGGTAGC GGCCCAGTAC
GACGGCTGGC TGGACGACGT CGACAACTAC GACGGCACCC ACGATTACAC GGGACAGGAC
GAGGTCACGG TCGCAGTCGG CGCGGTCGAC GGCCTCAAGT TCGGGCCGGC CGCGATCCTG
ATCGACCCCG GGACGACGGT CGTTTGGGAG TGGACCGGTG AGGGCGGCGC CCACAATGTC
GTCGCCGACG ACGAGACATT CAACAGCGGG GACCCGGTCA GCGAGGAGGG AGCCACCTTC
GAGTACACCT TCGACGACGC GTCCGACGGC GACACGTTCA ACTACCTCTG TGTCCCCCAC
GAGGCGGTCG GCATGAAGGG CGTTGTCGCG ATCGGATCGG TCGACGACGA CCTCGTGACG
CCCGGCGGCG ACGGGGGAGA TGGCGATGAC GGCGGCGACG GCAACGCCAC CGACGGCGGA
AATACGACCG ACGGCGGGAA CGCATCCGAC GGCGGACCCA GCGCCCCCGA CCTCTCCGCC
AACGACATCG GGGCGCTCGC GCTCGCGCTC GGCTTCGCCG GGGCGCTGCT CGTACCGCTG
TTCTACGCGG CCCACAAGAT GGCCAGCGAA GAGTAG
|
|---|
| Protein sequence | MTSNADETTM SRRGLFRVGA AGAAAATGLA AGSGGVAAQY DGWLDDVDNY DGTHDYTGQD
EVTVAVGAVD GLKFGPAAIL IDPGTTVVWE WTGEGGAHNV VADDETFNSG DPVSEEGATF
EYTFDDASDG DTFNYLCVPH EAVGMKGVVA IGSVDDDLVT PGGDGGDGDD GGDGNATDGG
NTTDGGNASD GGPSAPDLSA NDIGALALAL GFAGALLVPL FYAAHKMASE E
|
|---|
| |