Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1467 |
Symbol | |
ID | 7400294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1474163 |
End bp | 1474705 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643708528 |
Product | UspA domain protein |
Protein accession | YP_002566125 |
Protein GI | 222479888 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTAT ACGATCGGAT CCTCGTCCCG ACCGACGGCT CCGCCGAGGG GAGGCGGGCG GTCGCACACG CCCTGGACCT CGCATCGGTC CACGACGCGG ACGTGCACGC GCTGTACGTG GTCGACACGG CGAGCTACGC GGGGATGCCG ATGGAGACCT CGTGGGAGGG GGTCGGCGAC CTTCTGCGGG ACGATGCGAA CAAGGCGGTC GCGGAGGTCG AATCTCTCGC GGCCGAGACC GATCTCCACG TCGAGACGGG GGTTGCGGAG GGCTCCCCGA GCAAGGAGAT CATCCGGTAC GCCGAGGACA ACGGCTGCGA CCTGATCGTC ATGGGGACGC ACGGTCGGGG CGGGATCGAC CGGCTCCTCC TCGGGAGCGT CGCCGAGAAG GTGGTCCGCG GGTCGAGCGT TCCCGTGTTG ACGGTGCGGC TGGACGGTGA GGGCGCGGGA GGCGCGACCG TCGAGAAGGC GTCCGAAAGC GAGACCCCGG CCGAAAGCGA GACCCCAGCC GACGGAGAGA CGGAAGCGGC GGGACAAAGA TAG
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Protein sequence | MSLYDRILVP TDGSAEGRRA VAHALDLASV HDADVHALYV VDTASYAGMP METSWEGVGD LLRDDANKAV AEVESLAAET DLHVETGVAE GSPSKEIIRY AEDNGCDLIV MGTHGRGGID RLLLGSVAEK VVRGSSVPVL TVRLDGEGAG GATVEKASES ETPAESETPA DGETEAAGQR
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