Gene Hlac_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1467 
Symbol 
ID7400294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1474163 
End bp1474705 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID643708528 
ProductUspA domain protein 
Protein accessionYP_002566125 
Protein GI222479888 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTAT ACGATCGGAT CCTCGTCCCG ACCGACGGCT CCGCCGAGGG GAGGCGGGCG 
GTCGCACACG CCCTGGACCT CGCATCGGTC CACGACGCGG ACGTGCACGC GCTGTACGTG
GTCGACACGG CGAGCTACGC GGGGATGCCG ATGGAGACCT CGTGGGAGGG GGTCGGCGAC
CTTCTGCGGG ACGATGCGAA CAAGGCGGTC GCGGAGGTCG AATCTCTCGC GGCCGAGACC
GATCTCCACG TCGAGACGGG GGTTGCGGAG GGCTCCCCGA GCAAGGAGAT CATCCGGTAC
GCCGAGGACA ACGGCTGCGA CCTGATCGTC ATGGGGACGC ACGGTCGGGG CGGGATCGAC
CGGCTCCTCC TCGGGAGCGT CGCCGAGAAG GTGGTCCGCG GGTCGAGCGT TCCCGTGTTG
ACGGTGCGGC TGGACGGTGA GGGCGCGGGA GGCGCGACCG TCGAGAAGGC GTCCGAAAGC
GAGACCCCGG CCGAAAGCGA GACCCCAGCC GACGGAGAGA CGGAAGCGGC GGGACAAAGA
TAG
 
Protein sequence
MSLYDRILVP TDGSAEGRRA VAHALDLASV HDADVHALYV VDTASYAGMP METSWEGVGD 
LLRDDANKAV AEVESLAAET DLHVETGVAE GSPSKEIIRY AEDNGCDLIV MGTHGRGGID
RLLLGSVAEK VVRGSSVPVL TVRLDGEGAG GATVEKASES ETPAESETPA DGETEAAGQR