Gene Hlac_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1465 
Symbol 
ID7400292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1472473 
End bp1473675 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content65% 
IMG OID643708526 
Producttranslation-associated GTPase 
Protein accessionYP_002566123 
Protein GI222479886 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATC GGATCGGCCT CGTCGGCAAG CCCTCCGTGG GGAAGTCGAC ATTTTTCAAC 
GCCGCGACCA TGAACGACGT GCCCGAGGGC GCGTATCCGT TCACCACGAT CGACCCGACC
GTCGGCGAGG CGTACGTCCG CGTCGACTGC GCCGCTCCCG AGTTCGACGA GAGCTGTACG
CCGAACGTGG GCGTCTGCCG CGATGGCACC CGCTTCGTCC CGGTGAAGAT GGTCGACGTC
GCCGGCCTCG TCCCGGGCGC CCACGAGGGG CGCGGACTCG GCAATCAGTT CCTCACCGAC
CTCAACGAGA CCGACGTGTT GATCCACGTC GTCGACTTCT CGGGCAAAAC CGATATCGAG
GGCGAGACTA CCGAGGGCCA CGACCCGCGA GAGGACATCG ATTTCTTAGA GGAGGAACTC
GACGAGTGGT ACCTCGACGT GTTGGAGAAG GGTCTCGAAA AGTTCGAGAC GCGCTACCAC
GGCGCGGACG CCGCGATCGA GAAGGAGCTC GCCGAGCAGA TGTCCGCGTT CGGCATCGAC
AAAGACCGGA TGAAACAGGT GATCCTCGCG GAGGGGCTCG AACTCGACCC TGAGACGTGG
GACGACGCGG ACAAAGCCGA ACTCGCCCGC GAGATCCGCA AGCGCACGAA GCCGATGGTC
GTCGCCGCCA ACAAGATGGA CACGCCCGAA GCGCAGGCGA ACTGGGAGAC GATTACGACG
GATCCGGACT ACGACCACCT CTCGTTCGTC CCCGCGAGCG CTCACGCGGA AAAAGCCCTT
AAAAATGCGA ACGAGGCGGG CGTCGTCGAC TACACCCCCG GCGAGAGCGA CTTCGATATC
GTCGGTGATG TCTCCGGCGA GCAGGAGGCG GGCCTCGATC AGATCGGCGA ATTCGTCGCC
GAGTACGACG GGACCGGCGT GCAGGGCGCG CTCGAAGCCG CCGTCTTCGA CGTACTCGAC
TGTATCGCCG TCTTCCCCGG CTCCGCGAAC GGGAGCAAAG ACGAGAAGGG GGTCTTCCGC
GACTGCTTTA TCCTCCCCGG TGGGTCGACG ACCGAGGACT TCGCGTTCCA CATCCACTCG
GATATCGGCG AGGGGCTCCT CCACGGCACC GACTGTCGGA GCGGCCGGCA GGTCGGCACC
GATCACGAGC TCTCCCACCG CGATGTGATC GAACTGATCT CGACGAAGCA GGCCGCGCCG
TAA
 
Protein sequence
MSYRIGLVGK PSVGKSTFFN AATMNDVPEG AYPFTTIDPT VGEAYVRVDC AAPEFDESCT 
PNVGVCRDGT RFVPVKMVDV AGLVPGAHEG RGLGNQFLTD LNETDVLIHV VDFSGKTDIE
GETTEGHDPR EDIDFLEEEL DEWYLDVLEK GLEKFETRYH GADAAIEKEL AEQMSAFGID
KDRMKQVILA EGLELDPETW DDADKAELAR EIRKRTKPMV VAANKMDTPE AQANWETITT
DPDYDHLSFV PASAHAEKAL KNANEAGVVD YTPGESDFDI VGDVSGEQEA GLDQIGEFVA
EYDGTGVQGA LEAAVFDVLD CIAVFPGSAN GSKDEKGVFR DCFILPGGST TEDFAFHIHS
DIGEGLLHGT DCRSGRQVGT DHELSHRDVI ELISTKQAAP