| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1452 |
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| Symbol | |
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| ID | 7400279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1459990 |
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| End bp | 1460658 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643708513 |
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| Product | Bacterio-opsin activator HTH domain protein |
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| Protein accession | YP_002566110 |
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| Protein GI | 222479873 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACGC TACTGTCCGC TGCTCTTCCC CATGAGAAGT TCGTTCTCGC GGAGACCCTA
TCGTCGGTTC CGAACGCGAG CTTCGAGGTC GAAGGGGTGG TTGAGACGTG CGAGACCAGC
GTGATGCCCC TTATCTGGGC GAGCGCCGCC GATCACGAGC ATCTCGATAC GGCTCTCTTG
GATGATCCCA CGACAGAGGA GGTCGAGTTG CTCTCGGATC ACGCCGATCG GTGGTTGTAT
CGGATGAAAT GGGTCAACAA CGTCCAGAGC CTGCTTGAGA CGCTCGTGAC GAATCAGGCA
ACGATCCTGA CGGCGATAAC GAGCGACGGA CGCTGGATCG TTCGGCTCAT GTTCCCGACT
CACGACGGCG TGAGCGAAAC GATGGCCCAC TGTAAGGAGC ACGACATCGA CCTGGAGATG
ATCTCGATCT GCGAGATGAA CGATCAACCA GCGGGCCGGT ATGGACTCAC CGGTGCGCAG
TTTGAGGCGT TGGCGACTGC CTGGGAGCAG GGGTTCTACA CGGTTCCCCG CGAGGTCGAA
CTCGTCGACA TCGCTGCGGA TCTGGGCATC TCTCATCAGG CGCTCTCCGA ACGGTTACGA
CGGGGTATCG ACGCCCTCAT TCAGGACACG CTGATGGTCG ACGATGAACC AGCCGAACTC
ATCAGGTGA
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| Protein sequence | MVTLLSAALP HEKFVLAETL SSVPNASFEV EGVVETCETS VMPLIWASAA DHEHLDTALL
DDPTTEEVEL LSDHADRWLY RMKWVNNVQS LLETLVTNQA TILTAITSDG RWIVRLMFPT
HDGVSETMAH CKEHDIDLEM ISICEMNDQP AGRYGLTGAQ FEALATAWEQ GFYTVPREVE
LVDIAADLGI SHQALSERLR RGIDALIQDT LMVDDEPAEL IR
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