Gene Hlac_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1442 
Symbol 
ID7400269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1452496 
End bp1453305 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content65% 
IMG OID643708503 
Productprotein of unknown function DUF147 
Protein accessionYP_002566100 
Protein GI222479863 
COG category[S] Function unknown 
COG ID[COG1624] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGC TCACCGACCA CCTATCCGAT CTCGTCGAGG GCGCGGACGC GGTGCTGCTG 
TTCTCGCCGA CCAGCTCGTT TTTTAATCGG TTCGAGGACG GCGACACGGA GATCGTCGTC
GTCGCCCCCG ACAACGATGT CGACGCCGAG GTGTTCGTCG AACTTCCCCT CCCGTTCGAC
AACGTCAAAG ACCGGATCCG GTTCGGCATC GAGGGGGCGA TGGACGCCGA GCTCGTCTCT
GAGGGCGACG AAGTGGTCTG TATCGCGTCC GTCTTCGACG GCGGATCGGA CGCGGTGATC
CGCGTCACCG TCGATGAGAC AGTCCACACC GGGATCTACG ACCTGTTCGT CAACTCCCGG
GCGGAGCCGA GCGTGATCCG CGACGTGTTC GAGGTCGCCA TCGAACTCGG CCAGAAGGGA
CAGAAGGGGA AGCCGGTGGG CGCGCTGTTC GTCGTCGGCG ACGCGGGAAA GGTGATGAAC
AAGTCCCGCC CGCTGTCGTA CAACCCCTTC GAGAAGTCGC ACGTCCACGT CGGCGACCCT
ATTGTCAACG TCATGCTCAA GGAGTTCTCG CGGCTCGACG GCGCGTTCGT CGTCTCCGAC
TCCGGGAAGA TCGTCTCCGC GTACCGCTAC CTCGAACCGG GTGCGGAGGG CGTCGATATT
CCGAAGGGGC TCGGCGCGCG CCACATGGCG GGCGGCGCGA TCACCCGGGA CACGAACGCG
ACCGCGATCG TCCTCTCCGA GTCGGACGGG CTCGTGCGGG CGTTTAAGGC GGGAGAACTC
GTCCTGGAGA TCGATCCGGA GGAGTACTGA
 
Protein sequence
MASLTDHLSD LVEGADAVLL FSPTSSFFNR FEDGDTEIVV VAPDNDVDAE VFVELPLPFD 
NVKDRIRFGI EGAMDAELVS EGDEVVCIAS VFDGGSDAVI RVTVDETVHT GIYDLFVNSR
AEPSVIRDVF EVAIELGQKG QKGKPVGALF VVGDAGKVMN KSRPLSYNPF EKSHVHVGDP
IVNVMLKEFS RLDGAFVVSD SGKIVSAYRY LEPGAEGVDI PKGLGARHMA GGAITRDTNA
TAIVLSESDG LVRAFKAGEL VLEIDPEEY