| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1438 |
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| Symbol | |
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| ID | 7400265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1446586 |
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| End bp | 1449009 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643708499 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002566096 |
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| Protein GI | 222479859 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGGACG CCATCGAGTG GCTGCGGAAC CGACCGTTCT ACGAGGGACA GATCGCGGAG
CACCGCCGTC TGCCCGCCCG CGAGCCGGCG TACCGCGACG TCGATCTTGC CCCCCGGATG
GCCGACGCGC TCGCGAAAGA CGGGATCGAC CGCCTCTACC GGCACCAGGT CGAGGCGATC
GAGGCGGTCC GCGACGGCGA CGACGCCGTA CTCGCCACCG AGACCGCGAG CGGGAAGTCG
CTCGCGTACA CCGTGCCCGC CTTCGAGGCC GCGATGGACC ACGGGGGACG GACCCTCTAC
GTCGGCCCCC AGAACGCGCT GATCGCGGAC CAAGAGGAGT CGCTGTCGGA GCTAGCTCAC
GGGCTCGGCT TCGGAAGCGG CGTCTCGGTC GAATCGTACA CCGGTCGGCT CTCGCGGGGC
GAGAAGCGGG ACGTGCGCGA CCGGGAGCCG ACCGTGTTGC TGTCGAACCC GGACATGCTT
CACTACGCGC TGCTGCCGTA CGCCGGGCGC CTGTGGGACT GGTTCTTCTC GTCGCTGGAG
TACGTCGTGA TCGACGAGGT GCACAGCTAC CGCGGGGTGT TCGGCTCGCA GGTCGCCATG
ACCCTGCGCC GGCTCGCGCG GACCTGCGAG CGGTTCGGGT CGAGCCCGCA GTTCGTCTGC
TGCTCGGCGA CGATTAACAA TCCCGTCGAG CACGTCGCAA CCGTGACCGG CCGCGATCCC
ACCGGGATCA CGCTCGTCGA CGAGGACACC TCGGGTCGCG GGCCGCGCGA CTGGGTGCTG
TGGAACCCGC CGGAGTACGA CGACGACTGG CAGGAGCGCG GGAGCGGCCG TCGGAAGTCG
AGCCACACGG AGAGCAAACG GCTCTTCGTC GACCTCGTGA CGGCGGGCGC GCAGACGCTG
GCGTTCACGC GGGCCAGACA GACCGCGGAG CAGTACGCGA CCGACAGCGC GAGCGACCTC
CGAGAGCGGG GCGAGCGCGG GCTCGCGGGG AAGGTCGGCG CGTATCAGGC GGCCTTGAAC
GACGATCGGC GCCGCGAGAT CGAGGCGGAC CTCCATTCCG GCGACCTCCG GGGTGTCTGG
TCGACGAGCG CCCTCGAACT CGGCGTCGAC GTGGGCGGGC TCGACGCCGT GATTTTGGAC
GGCTACCCCG GCACGCGGAT GTCGGCGTAT CAGCGCGCGG GGCGGGCGGG CCGCGGCGAC
GACCCGGCGC TCGTGGTGAT GGTCGGCGGC GAAGACCAGC TTGATCAGTA CCTGATGCGC
AACCCGAGCG ATTTCTTCGA GGCGCCGCCG GAGGACGCGA TCTGCGACCC CGAGAACGGG
CAGCTGCTTC CAGGACATGT CGCTTGTGCG GCCGACGAGA GCTGGCTCTC GCCCGCCGAC
GAGCGGTTCT TCGGCGAGAC GTTCCCGGGC GTCGTCGCGG ACCTGACCGA CGAGGGAATT
TTGGATAGGC GGGAGGTCGC CGACGGGATC CGGTGGACAC ACGCCGGGTC GTCGAGCCCG
CAGCAGGCCG TGAGCCTCCG GACCGCCGGG GACCGCGAGA TCGACCTGAT CGACTCCTCG
CGCAACGAGA CGGTCGCCTC GCTCGGGTTC GGGGACGCGC TCCGCGACGC GCACCCGGGA
GCGATCTACC ACCAGCAGGG CCGAACTTAC GAGGTCACGA ATCTCGACCT CGACCGCGAT
GTGGCCGAAC TGCAGTCGTC GTGGGCCGAT TACTACACCC AGCCGCTCAC CGAGAAGGAC
ATCGTCGTGA ACGCGGATCT CGGCGAACGC GAGCTGTCGG CCCGCCCGGA CGTGCCGGTC
CGATTCGCGG ACGTGACCGT CACGGAGCAG ATCACGGGGT TCGTCCGGAA AGACACGGCG
ACCGGCGAGT CGCTCGGGGA GTCAGTGCTG GATCTCCCGG AGACGACGCT GCGGACGAAG
GCGCTGTACT TCCCGGTTCC GGGGGACATC GAGTCCGAGA TGCGCGCGCT CGGGGCCCGT
GACGCCGACG CTGACGGCAC GAACGAGGCG GCCGACGCCG ACGACACGGA GGCGGTGACC
GACGGCGGCG AAGGTCTGTC GGGCGGTGAG CACGCCTTCA ACGGCGGGAT CCACGCGGCC
GAACACGGTA TCATCTCGCT GTTCCCCTTC CACCTGCTGT GTGACCGCGC CGATATCGGG
GGCATCTCGA CGCCGTACCA CCCGCACACC GACGCCCCCG CGGTGTTCGT GTACGACGGC
CACCCCGGCG GCGTCGGGCT CACGCGCCGC GGCCACGAGC GGATCGAGGA GCTGATGGCC
CGCACGGCCC GGCTCATCGA CACCTGCGAC TGCGAGGGCG GCTGTCCGGC CTGCGTCCAG
TCACCTCACT GCGGCAACGC CAACGAGCCG CTGGCGAAGG CGCCGGCCGT GCGGCTGTTG
GAGGCGCTGA CGACGGACGA GTGA
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| Protein sequence | MEDAIEWLRN RPFYEGQIAE HRRLPAREPA YRDVDLAPRM ADALAKDGID RLYRHQVEAI
EAVRDGDDAV LATETASGKS LAYTVPAFEA AMDHGGRTLY VGPQNALIAD QEESLSELAH
GLGFGSGVSV ESYTGRLSRG EKRDVRDREP TVLLSNPDML HYALLPYAGR LWDWFFSSLE
YVVIDEVHSY RGVFGSQVAM TLRRLARTCE RFGSSPQFVC CSATINNPVE HVATVTGRDP
TGITLVDEDT SGRGPRDWVL WNPPEYDDDW QERGSGRRKS SHTESKRLFV DLVTAGAQTL
AFTRARQTAE QYATDSASDL RERGERGLAG KVGAYQAALN DDRRREIEAD LHSGDLRGVW
STSALELGVD VGGLDAVILD GYPGTRMSAY QRAGRAGRGD DPALVVMVGG EDQLDQYLMR
NPSDFFEAPP EDAICDPENG QLLPGHVACA ADESWLSPAD ERFFGETFPG VVADLTDEGI
LDRREVADGI RWTHAGSSSP QQAVSLRTAG DREIDLIDSS RNETVASLGF GDALRDAHPG
AIYHQQGRTY EVTNLDLDRD VAELQSSWAD YYTQPLTEKD IVVNADLGER ELSARPDVPV
RFADVTVTEQ ITGFVRKDTA TGESLGESVL DLPETTLRTK ALYFPVPGDI ESEMRALGAR
DADADGTNEA ADADDTEAVT DGGEGLSGGE HAFNGGIHAA EHGIISLFPF HLLCDRADIG
GISTPYHPHT DAPAVFVYDG HPGGVGLTRR GHERIEELMA RTARLIDTCD CEGGCPACVQ
SPHCGNANEP LAKAPAVRLL EALTTDE
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