| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1428 |
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| Symbol | |
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| ID | 7400747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1438608 |
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| End bp | 1440560 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643708489 |
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| Product | ABC-type transport system permease protein 1 |
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| Protein accession | YP_002566086 |
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| Protein GI | 222479849 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.450402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACC GAAGCGACCG AGTTCGGCAC CGTATTCGGG GCGCACAGCG TCGCCTTCGC
CGGATCCTCC GCGTCGCTCG CTGGGAGACG GTTCGGGCGA GCGGCGGCGT CGACCGGCGG
ACCCTGCTCG CGGCGCTCGC GCTCCTACTC GTCGCCGGCG GCGTCCTCGG CGGCGGGCTC
GCGGCCGGCG TCGTCGGGCT CGACGTCGAC CGCGACGTGT ACCGGGTCGC CGTCGACGGC
GACTCCCCGT ACGCGGATGC GGTCGAGGCC GAGCCGTCAC TCACAGCGGT CCCTCTCGGG
AGCGCCGCGC TCGGCGACAC GGCCGACCTT GTCGTGTTTG ACGGCAGGCA GAGTGGGTCG
ATCGAGACCG TTGCCGTTCG CGCCAGCGAC ACGCGGAAGG GCGAGGCCGC GGCCGCCGAG
TTCCGGGAGG CAGTCAAGGC GCACAACGAG CGACTGATGG CGGCCGAGGA GAATCGGACC
GCCGCGTTCC CGATCACCGT CACGCTCCAG TACATCGGCC GGACCAGCGG GCTCGACGAC
GGCTCGACGC TCGGCGGGGA CGGCTCCGAG AGTGACGGCG GCTCCGGACG CGCCAGTGGC
GACGATTCGG GCGACGCGAG CGGAGGTACC GACGGCGGGC TCACCGGCGG CGACACCGCG
AGCGAGGGCA GCGGGGGCGA CGATGGAGAT AACGGCGGAT TCGCCGTCCC CTCGGTTGGC
GGCGCGGCGT TCGGCGCCGA CACGGTCGGG TCGCCGGGGT CGATCTCGCC GCCCTTCCCG
TTCGTCTCGC TCCTCCTCGC GTTCGTCTTT CTCGTGCCGA TGAACTTCCT CATCCAGGCG
TACGGCTCGT CGGTCCTCGA CGAGCGGACG AACCGGCGCG GGGAGCCCCT GCTCGTCACG
CCGCTCTCGC CGGTCGACAT CGTCGCGGGG AAGACGCTCC CGTACGTCGC GGTCGCGGCG
CTCGTCACGA CGCTCATCGC AGTCGCCGTC GGCGGCGGGG CGCTCTCGGT GATCGCCGTG
CTTCCGGTGG CGTTGACCTT CCTCGCGGCC ACGTTCGTCG GCGCGATGTT CGCGCGGTCG
TTCAAGGAGC TCACCTTCGT CACGGTCGGC GTGAGCGTCC TCCTCACGAC GTACGCGTTC
GTGCCAGCGA TCTTCACGAA CGTCACGCCC GTGGCGCTGG TGTCGCCGCT CACGCTGGTC
GTCTTCGATC TGCAGGGCGA GGCGGTGGGA ATCGGCGAAA TCCTCTTCTC GACCGGCCCG
ATGGCGGTGG GGGCGGCGCT CCTGTTCGGG CTCGGGCTCG GGGTCTACCG CGAGGAGGAC
ATGTTAACCC AGAAGCCGGT CGGGCGGAAG TTCCTCGATG CGCTGGCGGT GCGACTCTCG
GGTATTGGGA AGCCGAACTC GGGCGGCAGG TCGCCGCGAG AACGACTCCG TGCGCTCGCG
CCGATCGCGT TCCTCACGGC CTGCACGATC CCCTTCGTGT TCGTCGCGGA GCTGCTGGCC
GTCGCGCTAC TCTTCGCACT GCCGGTGACC GTGTCGATCC CCGTGCTCTT GGTGACAATC
GCGTTCATCG AGGAACTTGC CAAGAGCATC CACCTCTACG CCGGGTTCGA GCGCGGCGCC
TTCGCCCGGA CCGATCGGGT CGCCGTCGCG GTCGGGACCG CCTCCGCGGT CGGCTTCTTC
CTCGCGGAGA AGGCCACCGC GGTCGTGCAG GCGGTCGGGC TCACGGAGCT GTACGTCGGC
CGCGCCGCGT TCGGGAGCGT GGCGGGGATG GAGGGGCTCC CGCCGATCGC CATTGTGGGG
TTGTTCTTCG CGCCCCTCCT GCTTCACGGG TTCGCGACGA CCGTCGCCGC AGTGGGCGCG
AGCCGGAGCC GGACGTACTA CGTCCTGACG CTGGCGCTGG CGACGCTGCT TCACGCGGCG
TACAACTTCG GGGTGGTGCG CCTCTATGCG TAA
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| Protein sequence | MTDRSDRVRH RIRGAQRRLR RILRVARWET VRASGGVDRR TLLAALALLL VAGGVLGGGL
AAGVVGLDVD RDVYRVAVDG DSPYADAVEA EPSLTAVPLG SAALGDTADL VVFDGRQSGS
IETVAVRASD TRKGEAAAAE FREAVKAHNE RLMAAEENRT AAFPITVTLQ YIGRTSGLDD
GSTLGGDGSE SDGGSGRASG DDSGDASGGT DGGLTGGDTA SEGSGGDDGD NGGFAVPSVG
GAAFGADTVG SPGSISPPFP FVSLLLAFVF LVPMNFLIQA YGSSVLDERT NRRGEPLLVT
PLSPVDIVAG KTLPYVAVAA LVTTLIAVAV GGGALSVIAV LPVALTFLAA TFVGAMFARS
FKELTFVTVG VSVLLTTYAF VPAIFTNVTP VALVSPLTLV VFDLQGEAVG IGEILFSTGP
MAVGAALLFG LGLGVYREED MLTQKPVGRK FLDALAVRLS GIGKPNSGGR SPRERLRALA
PIAFLTACTI PFVFVAELLA VALLFALPVT VSIPVLLVTI AFIEELAKSI HLYAGFERGA
FARTDRVAVA VGTASAVGFF LAEKATAVVQ AVGLTELYVG RAAFGSVAGM EGLPPIAIVG
LFFAPLLLHG FATTVAAVGA SRSRTYYVLT LALATLLHAA YNFGVVRLYA
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