| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1417 |
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| Symbol | |
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| ID | 7400736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1429166 |
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| End bp | 1430335 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643708478 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_002566075 |
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| Protein GI | 222479838 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCG ACTTCGATCG GCGGCGGTTC CTCAAGGCAG CAAGCGCGGC GGGCCTCGTC
GGCCTCGCCG GCTGTAGTGG CGGACCGAGC GGCGACGGGT CCGACGGCTC CGACGGTAAC
GACAGCTCCG ACGGAGACGA CGGGTCTGAC GGCTCGGACG GGAGCGACGG ATCGGACGGC
GAGGACGGGT CCGACGGAGA CGACGTGCCG GCGACGGTCG GCATCGTCTA TTCCGACGGC
GGCCTCGGCG ACAACTCGTT CAACGACGCG GCCCAGCAGG GAATTCTCCA GGCCGAAGAG
GAGTTCGGTA TTGAGTACGA CGAGTCGGAG CCGGACGGTG CCGGCGAGTT CGGGCAGTTC
CAGCAGCTGT ACGCGAGTTC GACGGATCCA GAATACGATC TGGTCTCCTG TATCGGGTTC
AACCAGGGGG ACGCGCTCAC CGAGACTGCA CCCCAGTACC CCGATCAGGA CTTCATGATC
GTCGACACCG TGGTCGACGA GCCGAACGTC GCGAACTACT TGTTCCGTGA GCAAGAGGGC
TCGTTCCTGA TGGGCGTGCT CGCCGGACGC CTGACCGAGA CGGAGTTCTC CGCGGGCGCG
GGATCGACCG ATCCCGACTC GACGACCGTT GGGTTCGTCG GCGGCGTCGA CAGCCCGGTC
ATCCGCCGGT TCCAAGCCGG CTTCGAGGCC GGCGTCGACT ACGCGTCCGA CAATGTCGAC
GTTACCACGA GCTACGTCGG CAGCTACGCC GACCCTTCGG GCGGGCAGGA GGCCGCACTG
TCGATGTACC AAAATGGGGT GGATATCGTC TATCACGCTT CGGGCGCGAC GGGCGTCGGC
GTGTTCCAGG CCGCACAGGC GGAAGGCCGG TTCGCGTTCG GTGTCGACCA GGACCAGTCG
ATCTCCAACG AGTCGTTCGC GGACGTGATC CTGGCGTCGA TGGTGAAGCG CGTCGACACC
GCGGTGTACG AGTCGATCTC GAACATCATC GACGACAACC ATCAGGGTGG TGAGACGCTC
GCGCTCGGGC TGGAGTCGAA CGGTGTCGAG TGCGTCTACG GCGACCAGAT CGGCGGCGAA
GTGCCCGACG ATATCGTGTC CGCCGTCTCC GACGCGCGCG ACGAGATCAT CGCCGGAAAC
ATCGACGTGC CGGAGACCAC GAGCGACTAA
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| Protein sequence | MASDFDRRRF LKAASAAGLV GLAGCSGGPS GDGSDGSDGN DSSDGDDGSD GSDGSDGSDG
EDGSDGDDVP ATVGIVYSDG GLGDNSFNDA AQQGILQAEE EFGIEYDESE PDGAGEFGQF
QQLYASSTDP EYDLVSCIGF NQGDALTETA PQYPDQDFMI VDTVVDEPNV ANYLFREQEG
SFLMGVLAGR LTETEFSAGA GSTDPDSTTV GFVGGVDSPV IRRFQAGFEA GVDYASDNVD
VTTSYVGSYA DPSGGQEAAL SMYQNGVDIV YHASGATGVG VFQAAQAEGR FAFGVDQDQS
ISNESFADVI LASMVKRVDT AVYESISNII DDNHQGGETL ALGLESNGVE CVYGDQIGGE
VPDDIVSAVS DARDEIIAGN IDVPETTSD
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