Gene Hlac_1391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1391 
Symbol 
ID7400710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1399488 
End bp1400228 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content72% 
IMG OID643708452 
ProductMethyltransferase type 12 
Protein accessionYP_002566049 
Protein GI222479812 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.974092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACG CCGCGTACCT GCTGGTCCAC GAGGACCGGG AGTACCTGCT AGAGCCGGGC 
GAGGAGTTCG GCACCGACCT CGGCGTCCTC GAGGTCCCCG AAGACGTCGA GGGCGGCGAC
ACCGTCGAGA CGCATCTCGG CACCGTCTTC GAGGTCCGCG AGCTTCGCGG CCCGGACCTG
TTCAACCACC TCGAACGCAC CGGCGCGCCG ATGATGCCCC GCGACGTGGG GCTCGTAATG
GGCCACACCG GCGCCTCCGG CGGCGATCGC GTGCTCGACG CCGGCACGGG GTCGGGAATC
CTCGCAGCAT ACCTCGGTCG CGCCGGCGCC GACGTGACCA GCTACGAGAT CGACTCCGAG
TTCGCCGAGG TCGCCCGCGG GAACATGGTG ACCGCCGGCG TGGCAGACCG CGTCGAGGTC
CGCACCGGCG ACCTCACCGA GGAACTGGAC GCGCTCGCCG ACGAGGACCC CTTTGACGTG
TTAACGCTCG ATACGGGCGA CGCCCCCGAA GTCGTCGAGC GCGCGGACGA CCTGCTCGCG
CCCGGAGGGT ACCTCGCCGT CTACTCCCCG TTCGTCGAGG GGACCCGCGA GGCCGCCCTC
GCCGCCCGCG AGGCCGGCTT TGAGGGCGTC GAGACGCTCG AAACGATTCA ACGGGAGATG
GACTTCTCCG ACCGCGGCTC CCGCCCCTCG ACCGCGGGCG TCGGCCACAC CGGGTACCTG
GTGTTCGGCC GGGCGCCGTA G
 
Protein sequence
MTDAAYLLVH EDREYLLEPG EEFGTDLGVL EVPEDVEGGD TVETHLGTVF EVRELRGPDL 
FNHLERTGAP MMPRDVGLVM GHTGASGGDR VLDAGTGSGI LAAYLGRAGA DVTSYEIDSE
FAEVARGNMV TAGVADRVEV RTGDLTEELD ALADEDPFDV LTLDTGDAPE VVERADDLLA
PGGYLAVYSP FVEGTREAAL AAREAGFEGV ETLETIQREM DFSDRGSRPS TAGVGHTGYL
VFGRAP