Gene Hlac_1355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1355 
Symbol 
ID7400673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1369752 
End bp1370924 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content72% 
IMG OID643708418 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002566016 
Protein GI222479779 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC AGTACCGCCA CACGGTGCTG TCGCTGTGTA TGCTCGCGTT CCTGGTGACG 
TACTTCGCTC GGCTGGCGAT CAGCCCCGTC GTCCCGCTGA TCGTCGACGA CTTCACGGTG
TCGAACACCG CGATCGGGGT CGCGCTCTCC GGGATGTGGC TGGCGTACGG CGCCGCCCAG
TTCCCGAGCG GCGTGCTCGC GGACCGGTAC GGCGAGCGGC GCGTCATCCT CGTCGCCGTC
GGCGGGACGA CGGCGATGAG CGTCGTGCTC GCGCTCGCGC CCGTGTTCCC CGCGTTCGTG
CTGGCGGCGG TGTGTCTCGG GCTCGTCGCC GGGCTCCACT ACGCGGTGGC GACGACGCTG
CTCTCCCGGA CCTTCGACGA CATCGGGACG GCGTTCGGGC TTCACTCCGT GGGCGGGCCG
CTCGCCGGGC TCGTGGCGCC CGTCGCCGCC GCGTGGGTCG GGTTCCGGTA CGGCTGGCGC
CCCGCGGTCG CGCTGGCCGC ACTGGTCGGC GCGCCGGTGT TCCTGCTGTT CGCGTGGCGT
GTCCGCCCGA CTGAGCCCCG GCGTCCCGAC CAGCCGATGC GGGAGCGGTT CGCGCTCGCG
CCACTCGTCG AACTCCTCTC GCGCCCGAGC GTCCTCCTCC CGTTGTTCGT CGCGATGGTC
GGCACGTACG TGGTGCAGGG CGTGATGTCG TTTCTCCCGA CGTTCCTCGT CGAGTTCCGC
GGATACTCGC CGTCGGTCGC TGCCGGCGTC TTCTCCGCGT TCTTCGTCGT CCGCGCCGTC
GCGCAGGTGG GGCTCGGGCG CCTCTCCGAC CGCGCGGGCC GCGACGTCAC TATCGGCGCG
GCGATGCTCG CAGGCGCGGT CGGCACCGCC GCCTTCGTTC TCGGTCCCGG GACCGCCGGC
GTCGCGGTCG CGGTGCTACT GGCCGGCTCC GGCGCGAGCT TCTTTTCGGC GATCGATCCG
CGGTTCATGG ACGCGCTTAG CGACGCAGAG CGCGGCGCCG GGTTCGGGCT CATCCGGACG
GTTTACACCG TGATCGGTTC CGCGGGCTCC GTCGGCGTCG GGCTCGCGGC GGACCTGTTC
GGCTGGGGCG TCTCCTTCGC GATTCTGGCG GTGCTGTTCG GAGTCACGTT CGCCGTGCTC
GTGGTGAACT GGGCGCTCGG GACGGGGTAC TGA
 
Protein sequence
MSWQYRHTVL SLCMLAFLVT YFARLAISPV VPLIVDDFTV SNTAIGVALS GMWLAYGAAQ 
FPSGVLADRY GERRVILVAV GGTTAMSVVL ALAPVFPAFV LAAVCLGLVA GLHYAVATTL
LSRTFDDIGT AFGLHSVGGP LAGLVAPVAA AWVGFRYGWR PAVALAALVG APVFLLFAWR
VRPTEPRRPD QPMRERFALA PLVELLSRPS VLLPLFVAMV GTYVVQGVMS FLPTFLVEFR
GYSPSVAAGV FSAFFVVRAV AQVGLGRLSD RAGRDVTIGA AMLAGAVGTA AFVLGPGTAG
VAVAVLLAGS GASFFSAIDP RFMDALSDAE RGAGFGLIRT VYTVIGSAGS VGVGLAADLF
GWGVSFAILA VLFGVTFAVL VVNWALGTGY