Gene Hlac_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1353 
Symbol 
ID7400671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1368103 
End bp1368846 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content68% 
IMG OID643708416 
Productprotein of unknown function DUF1037 
Protein accessionYP_002566014 
Protein GI222479777 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4813] Trehalose utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG TCACGGTCTG GAACGAGTAC CGCCACGAAC AAGAGAACGA CGCGGTCGCC 
GACGTGTACC CCGACGGGAT CCACGCGGTC ATCGCGGACG CCCTCCGCGA GGCCGGCCAC
GAGGTCCGCA CTGCGACCCT CGACGAGGGG CCGGATCACG GGCTCATCGA GGCGGTGTTA
GACGACACCG ACGTGCTCAC GTGGTGGGGC CACGCGGCCC ACGACGAGGT GCGCGACGAG
GTCGTCGAGC GCGTCCGCGA GCGCGTCCTC GACGGGATGG GCCTCTTGGT GCTCCACTCC
GCGCACTACT CGAAGATTTT TAAGCGGCTG ATGGGCACCA GCTGCTCGCT CAAGTGGCGG
GAGGCCGCCG AGACCGAGCG GCTGTGGGCC GTCGAGCCGA GCCACCCGAT CGCCGACGGG
ATCGGCGAGT ACATCGAACT GGAGGAGACG GAGATGTACG GCGAGCGGTT CGATATCCCC
GCGCCGGACA CGCTCGTGTT CAACTCCTGG TTCGCCGGCG GCGAGGTGTT CCGGTCCGGC
TGCTGTTACC GTCGCGGCAA CGGCCGGGTG TTCTACTTCC GCCCCGGCCA CGAGACGTAC
CCGATCTACC ACGACGACGA CGTGCGGCAG GTGCTCCGGA ACGCGGTCGA GTGGGCGACG
CCGGGGGACG GCCCAACGCC CGACTTCGGC AACGCCGATC CGATCGAAGA CATCGACATC
GACGACGACC GCACAGTCCA CTGA
 
Protein sequence
MARVTVWNEY RHEQENDAVA DVYPDGIHAV IADALREAGH EVRTATLDEG PDHGLIEAVL 
DDTDVLTWWG HAAHDEVRDE VVERVRERVL DGMGLLVLHS AHYSKIFKRL MGTSCSLKWR
EAAETERLWA VEPSHPIADG IGEYIELEET EMYGERFDIP APDTLVFNSW FAGGEVFRSG
CCYRRGNGRV FYFRPGHETY PIYHDDDVRQ VLRNAVEWAT PGDGPTPDFG NADPIEDIDI
DDDRTVH