Gene Hlac_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1347 
Symbol 
ID7399442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1361823 
End bp1362569 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content67% 
IMG OID643708411 
Productbeta-lactamase domain protein 
Protein accessionYP_002566009 
Protein GI222479772 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0129245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTA CTTGGCACGG CCACTCGACG TGGCACGTCG TCGTCGACGA CACCGAACTC 
CTGATCGATC CGTACTTCGA CAACCCGAAG ACCGACGTCG ATCCGGAAGA GCTCGACCCC
GACTACCTCC TCTTGACCCA CGGTCACTCC GATCACATCG GCGACGTGGA CCGCTACGAG
GGCGCGACAG TGGTCGCCAC CCCGGAGCTG ACGGGGTACA TCCAGGAAAA CTTCGGCCAC
GAGAACGCCG TCGGCGGGAT GGGGATGAAC ATCGGCGGCA CCGTCGAGTG CGGCGACGCG
TGGGTGACGA TGGTCCGCGC GGACCACTCG AACGGGATCG ACACGGGCTA CGGCACCTCC
GCCGGGATGC CGGCCGGGTT CGTCATCGGC GACAAGAAGC CGACCCAAGA GTCCGACCCC
GACTGCACGA CGTTCTACCA CGCCGGCGAC ACCGGGCTGA TGTCCGAGAT GGTCGACGTG
ATCGCGCCGT ACCTCGAACC CGACGCCGCC GCGCTGCCGA CGGGCGACCA CTTCACGATG
GGGCCGGCCG GGGCCGGCAT CGCCGCCGAC TGGGTGGGCG CCGACGTGGT GTTCCCGATG
CACTACGACA CGTTCCAGCC GATCGAGATC GACACGCGCG AGTTCGTCAA CGAGGTGAAG
GCGGCCGGCG CCGCGGCCGA GCCCGTCGTC CTCGAGGGCG ACGAGACGTA CGTGCTGGAG
AACGAATTCG GTAGCGACGG CGACTGA
 
Protein sequence
MELTWHGHST WHVVVDDTEL LIDPYFDNPK TDVDPEELDP DYLLLTHGHS DHIGDVDRYE 
GATVVATPEL TGYIQENFGH ENAVGGMGMN IGGTVECGDA WVTMVRADHS NGIDTGYGTS
AGMPAGFVIG DKKPTQESDP DCTTFYHAGD TGLMSEMVDV IAPYLEPDAA ALPTGDHFTM
GPAGAGIAAD WVGADVVFPM HYDTFQPIEI DTREFVNEVK AAGAAAEPVV LEGDETYVLE
NEFGSDGD