Gene Hlac_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1345 
Symbol 
ID7399440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1359849 
End bp1360592 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content69% 
IMG OID643708409 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_002566007 
Protein GI222479770 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.411511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCACG CGCGATTCCG CGACCCGGCC GGCTCGATCC GCGAGGGAAC GTACGACCCC 
GAGACCGACA CCGTCGCCTT CGCGGGCGAG GAGTACGCCC TCGACGACCC CGCGATCGAC
GTGCTCCCGC CCGCGGAGCC GACGAAGATC GTCTGTATCG GCCGCAACTA CGCCGACCAC
GCCGCCGAGC TCGACAACGA CGTGCCGGAC CGGCCCCTCC TCTTCTTGAA GCCGCCGAAC
GCGCTGGCGA GCCACGGCGA CGAGATCACG GTCCCCGCGG GGAAAGACCG GATCGACTGG
GAGGCCGAGA TCGCGGTCGT CATCGGCGAA CAGTGCAAAG ACGTCGACGC CGACGACGCG
ATGGACGTCG TCGCCGGGTT CACCTGCATG AACGACGTGT CGAACCGCGA CGACCAGGAC
CGCGAGCAGA ACTGGGTGCG CGGGAAGGCG TTCGACGGCG CCGCGCCGCT CGGCCCCGTG
ATGGCGACCC CCGACGAGGT GCCGGCCGAC GCGAGCGTCG AGCTCCGCGT CAACGGCGAG
ACGAAGCAGT CGAGCGACCG CTCGTACCTC ATGTTCGACG TGCCGACGCT GATCGAGGAG
ATCACGACCT ACCTCACCTT AGAGCCGGGC GACGTGATCT CGACCGGGAC GCCAGAGGGC
GTCGGCGCCC TCTCAGACGG CGACACCGTC GAAGTCGAGA TTGAGGGCGT CGGAACGCTC
GAACACGACG TGCGCGTGCC CTGA
 
Protein sequence
MHHARFRDPA GSIREGTYDP ETDTVAFAGE EYALDDPAID VLPPAEPTKI VCIGRNYADH 
AAELDNDVPD RPLLFLKPPN ALASHGDEIT VPAGKDRIDW EAEIAVVIGE QCKDVDADDA
MDVVAGFTCM NDVSNRDDQD REQNWVRGKA FDGAAPLGPV MATPDEVPAD ASVELRVNGE
TKQSSDRSYL MFDVPTLIEE ITTYLTLEPG DVISTGTPEG VGALSDGDTV EVEIEGVGTL
EHDVRVP