Gene Hlac_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1338 
Symbol 
ID7399433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1352804 
End bp1353622 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content70% 
IMG OID643708402 
ProductDMSO reductase family type II enzyme chaperone 
Protein accessionYP_002566000 
Protein GI222479763 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID[TIGR03482] DMSO reductase family type II enzyme chaperone 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.783269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTGT CGGAACCGAT CTCCGAACAC GACGGGCCCC GATTCGACGA GGAGTTACCG 
AGCGGCGCGA TCGACGACGA AACCGTCGCC CGCGGGAGCG TCTACGCGCT CGCTGCGGCG
GCGTTCACCG AGCCGAGTCA GGGCGTCTAC GAGCACTTCG CCGACGGCTC GCTCGACGAC
GCCGTCGCGA CGCTCGTCGA GCAGAGCGGC CTCGACGTCG AGCCGCCGGA CCTGACCGTC
GAAGACGACC GCGAGACGCT CGCGGCTCGG TACAACGACC TGTTCGTCGT CGGCTACTCC
GAGGTGATCG ACGGGACGGA CGGGACGGTC GAGAATCAGG GGCCGCCGGT GTCGCTGTAC
GAGTCGACGT ACCGCTCGGA CGTGTCGTGG AACGACGTGA ACCTCGATCT CGCCCGGGCG
TACGAGCACT TCGGATGCGA GATCGGCGGC GACGAGCGCC GCCACCACGA CCACGTCCGA
CTGGAGCTCG AGTTCGCGGG GTATCTCTGT CGGCTGGCCG CCGCGGGCGA CAACGCAGAC
AGCGGTGCCG ACGCCGCCGA GCCAGCCAAC CTCGACCGGG CGCGGCTCGA CTTCCACGAC
CGACACCTCT CCGTCCTCGC GTCGGGGCTT CGAGACGCCA TCGACGAGGA ACCCGGAACG
AGCGTCTACG GACGCCTCGC GCGCTTCCTC GACGCGTTCG TCGCCGCCGA CGTCGACGAT
CTGGCGGTCC GGCTCGACGC CGGCGTCGGA AGTGATCGCG AGCACGCGGT CGCTGACGGT
CCGGACGGAG ACGGGGCCGA CGGAGGTGGT CTGTCGTGA
 
Protein sequence
MTVSEPISEH DGPRFDEELP SGAIDDETVA RGSVYALAAA AFTEPSQGVY EHFADGSLDD 
AVATLVEQSG LDVEPPDLTV EDDRETLAAR YNDLFVVGYS EVIDGTDGTV ENQGPPVSLY
ESTYRSDVSW NDVNLDLARA YEHFGCEIGG DERRHHDHVR LELEFAGYLC RLAAAGDNAD
SGADAAEPAN LDRARLDFHD RHLSVLASGL RDAIDEEPGT SVYGRLARFL DAFVAADVDD
LAVRLDAGVG SDREHAVADG PDGDGADGGG LS