Gene Hlac_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1328 
Symbol 
ID7399423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1341756 
End bp1342928 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content71% 
IMG OID643708392 
Productpeptidase M24 
Protein accessionYP_002565990 
Protein GI222479753 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.690062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCG CGCGACTCGA CGACCGGCTC GCCGATCTCG ACACGGACGG GTACCTGATC 
GACGCCTCGC AGGACGACGC CAACCAGCTG TATCTCTCCG GGTTCACCGG CCCCGACCCG
TTCCTCACGC TGTACGCCGA CGGCGAGATC CACGTTCTCG TCGGCGGACT GGAGTACGGT
CGCGCCCGCA AGGAGGCGAC CGCCGACACC GTCGAGCGCC ACGCCGACTA CGACTACGAG
TACGGCGGCC GCGAGGCCCG CAACGACATG TACGCCCGGT TCGTTCGCGA CAAGGGCGTC
GAGTCCGTGT CGATGCCGCC GCGCGGCCCG GTCGGCACCG CGGACGCGCT CCGCGAGCGC
GGGATCGAGG TCGCCGTCGA CACCGACGAC CGGATCCGCG AGGTCCGAGC GGTCAAGACC
GACGAGGAGG TCGACGCGAT CCGCGAGGCC CAGCGCGCTA ACGAGGCGGC GATGCGGGCC
GCCGAGGCGC TGATCGCCGG CGCCGAGGTG GCCGGCGAAG GTGACGACAC AGAGACAGGT
GTCCTGCTTC ACGACGGCGA TGCCCTCACC AGCGAGCGAG TGACCGAGGA GATCGAGGTG
ACGCTGCTGC GGCACGGCTG TGCGCTCGAT CAGACGATCG TCGCCGGCGG CGTGCAGGCC
GCGGACCCCC ACGACCGCGG TTCGGGGCCG CTCCGGGCGG ACGAGGCGAT CATCGTCGAC
ATCTTCCCGC GGTCGAAGGC GACGAAGTAC AACGCCGACA TGACCCGGAC GTTCTGCGTC
GGCGAGCCGC CAGCGACGCT CCGCGAGTGG TACGATCTCA CCGAACGCGC GCTCGACGCC
GCGCTCGACG CCGTCGAGCC GGGCGCGACC GGCGAGGATG TCCACGCGGC GGCCTGCGAG
GTGTACGAGG ACGCGGGCGA GCCGACGTTC CGGACCGACC CCGAGACGGA GACCGGATTT
ATCCACTCCA CCGGCCACGG GGTCGGCCTC GACGTCCACG AGTCCCCGCG GCTCGCGAGC
GGCGGCGAGG AGCTGGAGCC CGGCCACGTG ATCACCGTCG AGCCCGGGCT CTACGACCCC
GAGGTTGGCG GCGTCCGGAT CGAGGACATC GTCGTCGTCA CCGAGGACGG CTACGAGAAC
CTCACGGCGT ACCCGATCGA GTTTGAGGTC TGA
 
Protein sequence
MNRARLDDRL ADLDTDGYLI DASQDDANQL YLSGFTGPDP FLTLYADGEI HVLVGGLEYG 
RARKEATADT VERHADYDYE YGGREARNDM YARFVRDKGV ESVSMPPRGP VGTADALRER
GIEVAVDTDD RIREVRAVKT DEEVDAIREA QRANEAAMRA AEALIAGAEV AGEGDDTETG
VLLHDGDALT SERVTEEIEV TLLRHGCALD QTIVAGGVQA ADPHDRGSGP LRADEAIIVD
IFPRSKATKY NADMTRTFCV GEPPATLREW YDLTERALDA ALDAVEPGAT GEDVHAAACE
VYEDAGEPTF RTDPETETGF IHSTGHGVGL DVHESPRLAS GGEELEPGHV ITVEPGLYDP
EVGGVRIEDI VVVTEDGYEN LTAYPIEFEV