| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1308 |
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| Symbol | |
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| ID | 7399403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1320665 |
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| End bp | 1322425 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643708372 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_002565970 |
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| Protein GI | 222479733 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGGA GTTCGGCCCT CCTGCAGAGC GAGCTCCTTC CGGAGGCGCT CGACATCTCG
TTCAAGCTGG TGCCGTCGAT CCTCGTGATC GGGATGTTGG GGCTGTTCCT CACGATCGGC
TACGTCTTCC GCGTGGCCGA CACCGATAAC ATGTGGGTCG CGGGCCGGTC CATCGGGAAC
GTCGAGAACG GGATGGCGAT CGGCGCCAAC TGGATGTCGG CGGCGTCCTA TCTCGGGATG
GCCGCGTCCA TCGCGCTGGC CGGCTTCTAC GGACTGGTGT TCGTTGTCGG CTGGACGACC
GGATACTTCA TCCTGCTCAT CTTCCTCGCC GCGCAGCTGC GCCGGTTCGG GAAGTACACG
GCGCCGGACT TCGTCGGCGA TCGATTCAAC TCCGACACCG CGCGCGCCAT TGCGGCGGTG
ACGACGTTCC TCATCGGCTT CGTCTACGCC ATCGGGCAGG CGAAGGGGAT GGCGCTCGTC
GGCCTGTACA TCTTCGGCAA TTACGGGGCG TACGTCCCCG GCTTAGACGG GTACCAGGTG
ATGGTCGTCG CCATGATGGT TGTCACCGTC GGCTACCTGA CGCTGTCCGG CATGCTGGGC
GCCACGAAGA ACCAGACCGT CCAGTACACC ATCCTCATCT TCGCGTTCGT CCTCGGGCTG
TTCGCCGTCG GCTACACCAA CGGCTACTCC ACGGTGTTGC CGCAGCTCGA GTACGGTGCG
CTGATCAGTC AGCTCGGCAG CGAGTTTTCC GAGCCGTTCG CGTCCTCGAG CTACTACCTG
TGGGTCGCCA CGACGTTCTC GCTGATCGTC GGCACCTGCG GGCTGCCGCA CGTGCTCGTG
CGATTCTACA CGGTTGAAAG CGAACGGACG GCCCGCTGGT CGACGGTCTG GGGGCTGTTC
TTCATCTGTA TCCTGTACTG GAGCGCCCCG GCGTTCGCGG CGTTCGGTAC CGACCTCTAC
TCGCAGAACG TCAACCCGAC CTACGGCGAT CCCGGGATGA CGGGCGCGGC CAGTGAGGTT
ATCGTCGTGC TGGCGGCGCA GCTATCGAAC CTCCCCGAGT GGTTCGTCGG CTTCGTCGCG
GCGGGCGGTA TCGCCGCCGC GATCGCGACT GTCGCCGGGC TGTTCATCGC CGGCTCGTCG
GCCATCAGCC ACGACATCTA CACGAACATC ATCAACGAGG ATGCGACACA GCGCCAGCAG
ATCTTCGTCG GCCGCCTCTC GATCGTCGCG CTGGGCGCGC TGACTACGTT GGCCGCACTC
AATCCCGCAT CCTCGATCGC CGCGCTCGTG GGATACGCGT TCTCGCTCGC CGGCTCCGTT
CTGTTCCCGA TGTTCTTCCT GGGTATGTGG TGGGAGAACG CCAACCGACA GGGGGCACTC
GCCGGCATGA CGACCGGACT GACCCTCTGG TCCATCCCGA TGATCAACCA GATCGTTCCG
ACGTACATCG GCTCGCTTGA GGCGCCGCTG TCGGCGGGGC TGGCCCAGTG GATGCCCGCC
ATCGGCTCGG CGCTCATCAC GCTCCCGATC GTGTTCATCG TCACCATTGC CGTTTCGATG
GCGACCGACG AACCGTCGCT CGAAACGAAG CGGATCGTCC GGCAGTGTCA CAGCCCCGAG
CCGATGGGGC AACAGGAGAC TGCCGAGGAT GTCGTCGCCG ACGGCGGCGA GGAGGTGGCG
ACTGATGGTG GCCGCGCAGC GGACGACGCG GGCGCCGATG GTGGCCGCGC AGCGGACGAC
GACGCGGCCA CGGAGGAGTA A
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| Protein sequence | MTGSSALLQS ELLPEALDIS FKLVPSILVI GMLGLFLTIG YVFRVADTDN MWVAGRSIGN
VENGMAIGAN WMSAASYLGM AASIALAGFY GLVFVVGWTT GYFILLIFLA AQLRRFGKYT
APDFVGDRFN SDTARAIAAV TTFLIGFVYA IGQAKGMALV GLYIFGNYGA YVPGLDGYQV
MVVAMMVVTV GYLTLSGMLG ATKNQTVQYT ILIFAFVLGL FAVGYTNGYS TVLPQLEYGA
LISQLGSEFS EPFASSSYYL WVATTFSLIV GTCGLPHVLV RFYTVESERT ARWSTVWGLF
FICILYWSAP AFAAFGTDLY SQNVNPTYGD PGMTGAASEV IVVLAAQLSN LPEWFVGFVA
AGGIAAAIAT VAGLFIAGSS AISHDIYTNI INEDATQRQQ IFVGRLSIVA LGALTTLAAL
NPASSIAALV GYAFSLAGSV LFPMFFLGMW WENANRQGAL AGMTTGLTLW SIPMINQIVP
TYIGSLEAPL SAGLAQWMPA IGSALITLPI VFIVTIAVSM ATDEPSLETK RIVRQCHSPE
PMGQQETAED VVADGGEEVA TDGGRAADDA GADGGRAADD DAATEE
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