Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1297 |
Symbol | |
ID | 7399392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1306874 |
End bp | 1308181 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643708361 |
Product | Haloacid dehalogenase domain protein hydrolase type 3 |
Protein accession | YP_002565959 |
Protein GI | 222479722 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.226594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGCGGC ACGATCTTCT CTATCGCTTA TACGACGAGT TCGACGTGGA GACCCTCCGA GAGTACCAGT CGCTCGTGGA CCTGTTCCCG CCGGTCGACT CGCGGGTAGC GCTGGAACAC TGGGAGGACG CCGGCGAAGA GCTCGCTCGG CTGAAACGCG AGATTCGCGA AGCGCTGCCC GCGGGCGCCA CCTTCGCGGA GGTCGCGGCC TACGCTGACC GCGAGGCGGC GTTCACTGCG CTCGATCTGC ACGCGCGCTA CGACCGCGCC GTCAACGCCC TCGTGTTGGA CGTCGACGAG ACGCTCCGGT CCGCGGGCGG CACGGACAAC GAGATCCCCC GCGAGACGCT CCACATGCTG ACGGAGCTGC ACGACGCCGG CGTGCCGATC GTTATCTGCA CCGGTCAGAC GCTGGAGAAT GTGAAGGGGT TCATGATCCA GGGGCTCGGC AACGAACTCG TCCACTCCGG GCGCTTCTCG ATCGTCTACG AGGCCGGCAA CGGCGTGTTC ACGGCCGGGC ACGGATCGCG CACGAAGTGC CTGCTGTACG AGGACCTCGA CGAGGCGGTC CGGGGGGTCT TCGGCGCGGT GCGGTCGCGC GTGCTCCCCG ATGCGCCCGA GAACGTCCGA CGCGGCTGTC ACCTTCAGGG CAACGAGTTC AACGTCACCC TGAAGCCGAA CTTCGAGACC GGCGGCGCGG ACGCCGAGGC CGTGATCGAC GACGGGCTCA TCCACCTGAT CGACCTGCTC GGCGAGGTGG TCGTCGATCG GATCGCTGAG GACCTCGACC CGAGTGACTT CGACACTGAG GGCGACGCGA CCAACGCCGA CCTCGCGGAC CGCGGCGCGG CGTGGGCGCG CGCTCATTAC GCGGCGGCCG ACCCCGAGAT CCGAGAGGTG ATCGAGGCGA CCGCGGTCGA TAACCCGATC GACGACCCGG CCGAAATCGA GGACGTGCCG GAACCGGTCG CCGCGCTGTT CGACCGGATA GACGTCGGTT ACTACCGCGC GGACGCCGCG GAGATCAGCT CGCTAGAGTT AGACAAGGTT GCAGGCGTCG AGGCGGCGCT CGACGTGCTC GATGTGCGGG ATCCGTTCCT ACTCGTGATG GGCGACAGCA AGTCTGATCT CCGCGTGATG GAGTGGGCTG CCGAGCACGA CGCGGGGATC GCCGCGGCGC CGGAACACGC CTCTGCGGAC GTGCTCTCGC ACGTACTCGA CCGCGACGAA CTGGTGTTTG GCAGGGGCCA ATCCGCGACA ATACTTCGGA CGGTCTACGT CCTCAACCTG CTGGCTCAAC TGGAGTAA
|
Protein sequence | MERHDLLYRL YDEFDVETLR EYQSLVDLFP PVDSRVALEH WEDAGEELAR LKREIREALP AGATFAEVAA YADREAAFTA LDLHARYDRA VNALVLDVDE TLRSAGGTDN EIPRETLHML TELHDAGVPI VICTGQTLEN VKGFMIQGLG NELVHSGRFS IVYEAGNGVF TAGHGSRTKC LLYEDLDEAV RGVFGAVRSR VLPDAPENVR RGCHLQGNEF NVTLKPNFET GGADAEAVID DGLIHLIDLL GEVVVDRIAE DLDPSDFDTE GDATNADLAD RGAAWARAHY AAADPEIREV IEATAVDNPI DDPAEIEDVP EPVAALFDRI DVGYYRADAA EISSLELDKV AGVEAALDVL DVRDPFLLVM GDSKSDLRVM EWAAEHDAGI AAAPEHASAD VLSHVLDRDE LVFGRGQSAT ILRTVYVLNL LAQLE
|
| |