Gene Hlac_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1297 
Symbol 
ID7399392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1306874 
End bp1308181 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content67% 
IMG OID643708361 
ProductHaloacid dehalogenase domain protein hydrolase type 3 
Protein accessionYP_002565959 
Protein GI222479722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.226594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGGC ACGATCTTCT CTATCGCTTA TACGACGAGT TCGACGTGGA GACCCTCCGA 
GAGTACCAGT CGCTCGTGGA CCTGTTCCCG CCGGTCGACT CGCGGGTAGC GCTGGAACAC
TGGGAGGACG CCGGCGAAGA GCTCGCTCGG CTGAAACGCG AGATTCGCGA AGCGCTGCCC
GCGGGCGCCA CCTTCGCGGA GGTCGCGGCC TACGCTGACC GCGAGGCGGC GTTCACTGCG
CTCGATCTGC ACGCGCGCTA CGACCGCGCC GTCAACGCCC TCGTGTTGGA CGTCGACGAG
ACGCTCCGGT CCGCGGGCGG CACGGACAAC GAGATCCCCC GCGAGACGCT CCACATGCTG
ACGGAGCTGC ACGACGCCGG CGTGCCGATC GTTATCTGCA CCGGTCAGAC GCTGGAGAAT
GTGAAGGGGT TCATGATCCA GGGGCTCGGC AACGAACTCG TCCACTCCGG GCGCTTCTCG
ATCGTCTACG AGGCCGGCAA CGGCGTGTTC ACGGCCGGGC ACGGATCGCG CACGAAGTGC
CTGCTGTACG AGGACCTCGA CGAGGCGGTC CGGGGGGTCT TCGGCGCGGT GCGGTCGCGC
GTGCTCCCCG ATGCGCCCGA GAACGTCCGA CGCGGCTGTC ACCTTCAGGG CAACGAGTTC
AACGTCACCC TGAAGCCGAA CTTCGAGACC GGCGGCGCGG ACGCCGAGGC CGTGATCGAC
GACGGGCTCA TCCACCTGAT CGACCTGCTC GGCGAGGTGG TCGTCGATCG GATCGCTGAG
GACCTCGACC CGAGTGACTT CGACACTGAG GGCGACGCGA CCAACGCCGA CCTCGCGGAC
CGCGGCGCGG CGTGGGCGCG CGCTCATTAC GCGGCGGCCG ACCCCGAGAT CCGAGAGGTG
ATCGAGGCGA CCGCGGTCGA TAACCCGATC GACGACCCGG CCGAAATCGA GGACGTGCCG
GAACCGGTCG CCGCGCTGTT CGACCGGATA GACGTCGGTT ACTACCGCGC GGACGCCGCG
GAGATCAGCT CGCTAGAGTT AGACAAGGTT GCAGGCGTCG AGGCGGCGCT CGACGTGCTC
GATGTGCGGG ATCCGTTCCT ACTCGTGATG GGCGACAGCA AGTCTGATCT CCGCGTGATG
GAGTGGGCTG CCGAGCACGA CGCGGGGATC GCCGCGGCGC CGGAACACGC CTCTGCGGAC
GTGCTCTCGC ACGTACTCGA CCGCGACGAA CTGGTGTTTG GCAGGGGCCA ATCCGCGACA
ATACTTCGGA CGGTCTACGT CCTCAACCTG CTGGCTCAAC TGGAGTAA
 
Protein sequence
MERHDLLYRL YDEFDVETLR EYQSLVDLFP PVDSRVALEH WEDAGEELAR LKREIREALP 
AGATFAEVAA YADREAAFTA LDLHARYDRA VNALVLDVDE TLRSAGGTDN EIPRETLHML
TELHDAGVPI VICTGQTLEN VKGFMIQGLG NELVHSGRFS IVYEAGNGVF TAGHGSRTKC
LLYEDLDEAV RGVFGAVRSR VLPDAPENVR RGCHLQGNEF NVTLKPNFET GGADAEAVID
DGLIHLIDLL GEVVVDRIAE DLDPSDFDTE GDATNADLAD RGAAWARAHY AAADPEIREV
IEATAVDNPI DDPAEIEDVP EPVAALFDRI DVGYYRADAA EISSLELDKV AGVEAALDVL
DVRDPFLLVM GDSKSDLRVM EWAAEHDAGI AAAPEHASAD VLSHVLDRDE LVFGRGQSAT
ILRTVYVLNL LAQLE