| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1290 |
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| Symbol | |
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| ID | 7399385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1298542 |
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| End bp | 1300398 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643708354 |
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| Product | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase |
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| Protein accession | YP_002565952 |
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| Protein GI | 222479715 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC CGAACCGGAA CACGCTGTGG GCGCGCGCCC TGATCGACGA GCTCGTCGCC
GCGGGCGTCG ACGCCGTCGT GGCCTCGCCC GGGAGCCGCT CGACGCCGCT GACGGTGGCC
GCCGCGCGCA CCGACGACCT GCGCGTCTTC TCCCAACTGG ACGAGCGCTC GGCCGCCTAC
TTCGCCCTGG GCCGCGCGCG CCGAACCGGG AAGGTGACGC CGCTGATCTG CACCTCCGGC
ACCGCCGCCG CCAACTACCA TCCGGCCGTG ATGGAAGCGA GCGAGGCCCG CGTCCCCCTG
CTCGCGCTCA CAGCCGACCG CCCGCCGGAG CTCCGCGACT CGGGCGCGAA CCAGACCGCC
GATCAGGAGA AGCTGTACGG TGACGCCGTC CGGTTTTATA AGGATCTGCC GGAGCCCGCC
CCCAACGACC GCGCGCTCCG CTCGCTCCGG ACCACCGTCG CCCGCGCCGT CGGGACCGCC
GAGGGCGCGG ATCCCGGGCC GGTCCACCTC AACGTTCCCT TTAAAAAGCC GCTGGAGCCG
ACCCGGGTCC TCGACGACGT GCCCGCCGAC CTCGATCCAG TCGCCGAACG CGGTCGCGAC
GGCCCCTACG TCGACGTGAC GCCCGGGTCG CCCGAGCCGG GCGACGACGC ACTCCGGCGG
CTCGGCAACG AGCTTATGAC GACCGACCGC GGGCTGATCG TCGCCGGCCC CGCGGACCCG
CCGGGGCTCG ACGCCGAGGC CGTCACGGCG CTGTCGCACG CGACGGGGTT CCCGATCCTC
GCCGACCCGC TCTCCGGCGT CCGGTTCGGC GGCCACACCC GTGTCGCGCC CGTGATCGGC
GCCTACGACG CGTACCTCTC GGCGGAAGTC GCTGGGGAGG CGGGCGACGC CGATGCGTCT
GATAGCTGGA ACGACCCCGA AGTCGTCCTC CGACTCGGCG CGTCGCCTAC CTCCAAGCGC
CTCCGAAAGT ACCTCGCCGA GACGGGCGCC GACCAGTACC AGGTCGATCC CGCCGGGCGC
TGGCGCGAGG CGGAGTTCGC GGCGACCGAC CTCGTCGTCG CCGAGCCGAG CCGCCTCTGC
GCTCGCCTGT CCCGGCTCGT TGCTGGCGGC GACGGCGACG CTGACTGGCG CGCGCAGTGG
GAGGACGCTG ACCGAGTCGC CCAAGAGATC CACGGTCGAG AGCGAGACGG GGACATCCCG
GCCGACGACG AGCCGGTCGA GTTCCACGAA GGCGACGCGC TCCGCGTGGT GGCCGACGCG
CTTCCCGACC CCGCGACGCT GTTCGTCTCC AACTCGATGC CGGTGCGCGA CCTCGACCGC
TTCGTCGGGC CGACGACGAC GAGCGTCACC GCCCTCGGCA ACCGCGGCGT CTCTGGGATC
GACGGGATCG TCTCCAGCGC GCTCGGCGCC GGCTCCGCGA CGACCGACGA CCTCACGCTC
GTCGTCGGCG ATCTGGCGCT CTACCACGAC ACGAACGGCC TCCTCGCGCT CGATCGCTGC
GACGTCGACG CGACGGTCGT GCTGATCAAC AACGACGGCG GCGGGATCTT CCACGAGCTC
CCGATCGAGT CGTTCGAACC GGAGTTCACG GAGTCGTTCA AAACGCCGCA CGGCATCGAG
TTCGAGCCGA TGGCCGATCT CCACGGGCTG GCGTACACTC GGATCGACGC GCGACCGGAC
TCCGTGGAGT CTGCTGGGAA CGTCGCTGAC GACCTCGCGG ATGCGTACAC GGGAGCCCGC
GACGCTGACG GCTCGCACCT GATCGAGGTG CGGACGGACG CCGAGTCGAG CCACCGCACC
CGCAAGCGCC TCGAAGCGGC CGTCGATCGC GCGGTCCACG GCGACGAAGC GGAATAG
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| Protein sequence | MTAPNRNTLW ARALIDELVA AGVDAVVASP GSRSTPLTVA AARTDDLRVF SQLDERSAAY
FALGRARRTG KVTPLICTSG TAAANYHPAV MEASEARVPL LALTADRPPE LRDSGANQTA
DQEKLYGDAV RFYKDLPEPA PNDRALRSLR TTVARAVGTA EGADPGPVHL NVPFKKPLEP
TRVLDDVPAD LDPVAERGRD GPYVDVTPGS PEPGDDALRR LGNELMTTDR GLIVAGPADP
PGLDAEAVTA LSHATGFPIL ADPLSGVRFG GHTRVAPVIG AYDAYLSAEV AGEAGDADAS
DSWNDPEVVL RLGASPTSKR LRKYLAETGA DQYQVDPAGR WREAEFAATD LVVAEPSRLC
ARLSRLVAGG DGDADWRAQW EDADRVAQEI HGRERDGDIP ADDEPVEFHE GDALRVVADA
LPDPATLFVS NSMPVRDLDR FVGPTTTSVT ALGNRGVSGI DGIVSSALGA GSATTDDLTL
VVGDLALYHD TNGLLALDRC DVDATVVLIN NDGGGIFHEL PIESFEPEFT ESFKTPHGIE
FEPMADLHGL AYTRIDARPD SVESAGNVAD DLADAYTGAR DADGSHLIEV RTDAESSHRT
RKRLEAAVDR AVHGDEAE
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