Gene Hlac_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1281 
Symbol 
ID7399376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1291784 
End bp1292830 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content70% 
IMG OID643708345 
Productaromatic amino acid beta-eliminating lyase/threonine aldolase 
Protein accessionYP_002565943 
Protein GI222479706 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCG ACGAGGACAC CATCGACCTG CGATCCGACA CCGTCACGAC TCCCTCTGAG 
GCGATGCGCG AGGCCGCCCG CGACGCCGAG GTCGGCGACG ACGTGTACCG GGACGACCCG
ACTGTCAACG AGTTAGAGCG CCGCGCCGCC GATGCGGTCG GCACCGAGGC CGCGCTGTAC
GTCCCCTCCG GGACGATGGC CAACCAGATC GCCGTCCATG TTCACACCGA GCCCGGACAG
GAACTCCTCT TAGAGCGCGA GTCTCACATC TACCGGTGGG AGCTGGCGGG CGCGTCGAAG
CTCTCGGGCA CCCAGACCCG AACGATCGAT GCGGGCGATC GCTGCGTCCC GACGCCCGAG
TCGGTCCGAG AGGGGCTCGT CGAGGAGGAC CTCCACCGGC CCGGCACCGG ACTCCTGTCG
CTGGAGAACA CCCACAACTA CCGCGGCGGG ACGGCGATCC CCGTCAACCA GATCACCGCA
GCTGCCGAGG TCGCTCGCGA CGCCGACGTG CCGGTCCACC TCGACGGCGC GCGCGTGTTC
AACGCCGCGG TCGCGCTCGG CGTCGACGCG AGCGAAATCG TCGCGCCCGT CGACACCGTC
ACCTTCTGTC TCTCCAAGGG GCTCGGCGCG CCCGTCGGCT CGATCGTCGC CGGCGACGAG
GCGTTCGTCG AGGACGCCCG ACGCGTCCGC AAGCTGTTCG GCGGCGGGAT GCGACAGGCC
GGGATGATCG CCGCGCCGGG TCTGCTCGCC CTCGAAAACG TCGACCGGCT CGTCGACGAC
CACGCCAACG CCGAGCGACT CGCGACCGGC CTCGACGCGC TCGACGGGAT CCACGCGCCC
GAACCCGACA CGAACATCGT CGTCGCGCAC ACCGAGGACG CCGGAATCAC GGCATCCGAC
CTCGTGACGG CCTGTAAGGA TGCGGGCGTC GGCTGCGTGG AGTTCGCCGA GTACACGACG
CGATTCACCA CCCACCTCGA CGTCGACGGC GATGACATCG ACGCCGCGAT CGACCGGATC
GGCGACGTGA TCGCGGAGCT GGCGTAG
 
Protein sequence
MEIDEDTIDL RSDTVTTPSE AMREAARDAE VGDDVYRDDP TVNELERRAA DAVGTEAALY 
VPSGTMANQI AVHVHTEPGQ ELLLERESHI YRWELAGASK LSGTQTRTID AGDRCVPTPE
SVREGLVEED LHRPGTGLLS LENTHNYRGG TAIPVNQITA AAEVARDADV PVHLDGARVF
NAAVALGVDA SEIVAPVDTV TFCLSKGLGA PVGSIVAGDE AFVEDARRVR KLFGGGMRQA
GMIAAPGLLA LENVDRLVDD HANAERLATG LDALDGIHAP EPDTNIVVAH TEDAGITASD
LVTACKDAGV GCVEFAEYTT RFTTHLDVDG DDIDAAIDRI GDVIAELA