| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1280 |
|---|
| Symbol | |
|---|
| ID | 7399375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1290098 |
|---|
| End bp | 1291624 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643708344 |
|---|
| Product | peptidase M32 carboxypeptidase Taq metallopeptidase |
|---|
| Protein accession | YP_002565942 |
|---|
| Protein GI | 222479705 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2317] Zn-dependent carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGG AAGCCGCGGC CGACGACGCA GCCGACGCCC CCGAGGCGTA CGACGCCCTC
CTGGACCGCG TTCGACGCTG GAACGCGGTC GGGAGCGCCG CCGGCGTGCT CGGGTGGGAC
CAACAGGTGA TGATGCCCGA AGGGGGCACT CCCGCGCGGT CGAAGCAGCT CTCGACGCTC
TCCTCGATCC GCCACGACAT GGTCACCGAC GAGGAGACGG GCGACCTGCT CGACGAACTC
GCCGACGCCG ACCTCACCGA CGAGCGGGCG GCGGTCGTGC GCGAGATCCG CCGCGACTAC
GAACGCGCCG ACGCCGTCCC CGTCGAGCTC GTCGAGGAGA TCTCCGAGAC GGGCACGGAA
GCGCTACAGG CGTGGGAGGA GGCGAAAGCC GAGGACGACT TCGACGCGTT CGCACCCTAC
TTGGAGAAGC ACGTCGAACT GAAACGCGAG TACGCCGAGC ACATCGACCC CGACCGCGAC
CCTTACGAGG TGCTCTTCGA GGACTACGAG CCGTGCCTCT CGATGGAGCG CGCGGAGTCG
ATCCTCGAGG AGCTCCGCGA GACGCTCGTC CCCATGATCG ACGCGATCCG CGAGTCCGAC
GCCGACCTCG CCGTCGACAC CTTCGAGGGA ACCTTCCCAG AAGCGGAGCA GGAGGCGCTG
GCGCGCGAGA CGCTCGAACT GGTCGGCTAC GACTTCGACC GCGGCCGGCT CGACGTCTCC
TCGCACCCGT TCACCGCGGG AAACCAGTTC GACTGCCGGG TGACCACCCG ATTCGACGAG
TCCGACCCGC TCGGCGCGAT CGGCTCGACG ATCCACGAGT TCGGCCACGC GCAGTACAAC
CTCGGGCTCC CGCAGGAGCA GTTCGGGACC CCGCTCGGGG AATCCCGTGA TCTGTCGGTC
CACGAGTCGC AGTCGCGGCT CTGGGAGAAC CACGTTGGTC GCAGCCGGGC GTTCTGGGAG
CTGTTCCTCC CGACCTTCCA AGAGCACTTC CCGGAGACCG ACGACGCCAC CGTCGAGGAC
GCCTATCAGG CGTTCAATCA GGTCCACGAG GACAACCTCA TTCGCGTCGA GGCCGACGAA
CTCACCTATC ACCTCCACAT CGTCGTCCGG TTCGAGATCG AACGCGACCT GGTCCGCGGC
GACCTCGCGA TTGAGGACGT ACCCGAGGCC TGGAACGACA AGTACGAGGA GTACCTCGGA
ATCCGCCCCG ACAACGACGC CGAGGGCTGC CTGCAGGACA TCCACTGGAG CCACGGCAAC
TTCGGCTACT TCCCCACTTA CTCGCTCGGC TCCGTGATGG CCGCCCAGCT GTTCGCGGCC
GCCGAATCGG AGATCGACGA CCTCGACGAC CAGATCGCCG CGGGCGAGTT CGACGACCTT
CGGGAGTGGC TCGGTGAGAA CGTCCATCAG CACGGCTCCC GCTACGAGAC GAACGAGCTG
GTGAAACGCG CCACCGGCGA GGACTTCTCG GCGGACGCCT TTACCGACTA CGTCGAGGAG
AAGTACGGCG AGCTGTACGG TATATAA
|
|---|
| Protein sequence | MATEAAADDA ADAPEAYDAL LDRVRRWNAV GSAAGVLGWD QQVMMPEGGT PARSKQLSTL
SSIRHDMVTD EETGDLLDEL ADADLTDERA AVVREIRRDY ERADAVPVEL VEEISETGTE
ALQAWEEAKA EDDFDAFAPY LEKHVELKRE YAEHIDPDRD PYEVLFEDYE PCLSMERAES
ILEELRETLV PMIDAIRESD ADLAVDTFEG TFPEAEQEAL ARETLELVGY DFDRGRLDVS
SHPFTAGNQF DCRVTTRFDE SDPLGAIGST IHEFGHAQYN LGLPQEQFGT PLGESRDLSV
HESQSRLWEN HVGRSRAFWE LFLPTFQEHF PETDDATVED AYQAFNQVHE DNLIRVEADE
LTYHLHIVVR FEIERDLVRG DLAIEDVPEA WNDKYEEYLG IRPDNDAEGC LQDIHWSHGN
FGYFPTYSLG SVMAAQLFAA AESEIDDLDD QIAAGEFDDL REWLGENVHQ HGSRYETNEL
VKRATGEDFS ADAFTDYVEE KYGELYGI
|
|---|
| |