Gene Hlac_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1268 
Symbol 
ID7399363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1279941 
End bp1280369 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content68% 
IMG OID643708332 
ProductMov34/MPN/PAD-1 family protein 
Protein accessionYP_002565930 
Protein GI222479693 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC TCAGCCGAGC GGCCTACGAC GACATCGTAT ACCGCGCGTA CGGCGGTGGG 
GAGGCGGAGA TCTGTGGCGT CCTCGCTGGC ACCCACGGGA CCGACGGAGG GGCGAGCGTC
GTCACGGAGA CCTACGAGGC GGAGAACGTC GCCGAAACCC CCCAGATACG GTACCTGATC
GATCCCGAGG AACAGCTCGA ACTCATCGAG CGGGTCGAGG ACGACGGACT CGACGTAGTT
GGGTTCTACC ACTCGCACCC GACCGGGCCG ACCCACCCGA GCGAGACGGA CGCCGCGCGG
GCGACGTGGC CCGGCCACTC GTACGTCATC TGCGCGCTCG ACGGCTACCC GTTCGTCGGC
TCGTGGCGCT GGCGTGGGGA CGACGACGGG TTTGAACAGG AGACGGTCGC GGTGCGGAGT
GAGCGGTAG
 
Protein sequence
MIELSRAAYD DIVYRAYGGG EAEICGVLAG THGTDGGASV VTETYEAENV AETPQIRYLI 
DPEEQLELIE RVEDDGLDVV GFYHSHPTGP THPSETDAAR ATWPGHSYVI CALDGYPFVG
SWRWRGDDDG FEQETVAVRS ER