Gene Hlac_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1257 
Symbol 
ID7399525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1268987 
End bp1270009 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content72% 
IMG OID643708321 
Producthypothetical protein 
Protein accessionYP_002565919 
Protein GI222479682 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGT GGGACAAGCA GAGCGACGCC CCCTCCCCCG CCGACCGCGT TCTCGCGGTC 
CCCTGCGAGG GCGACGACCT CCTGGCGCTG TTCGCGCTCG ACACGGGAGA GCGGCTCGGT
GAAGTCCCGG TCGGGAGCCA TCCGGTCCAC GCGACGACGT GCCGCGGGCG GACCGTCGTC
GCGACCATGG GCGACCGAGC CGTCACCGCG GTCGACGCGA GCGGCGAGGT GACCCAGATT
GAGACCGGTG TGTTGGGGCC GTCGCACTTC GCGGCCGCGA ACGGGGAGTT GTACGTCTCC
TGCTCCGCCG GCGACGCCCT CGCCGTTATC GACTCCGAGC GCCTGACGCT CGTCGACCGC
GTCGCGGTCG GCGCGGAGCC GCACGAGGTC GCGGTCGCCC CGGACGGCGA CCGGCTCTAC
TCCGGGAGCC GCCGCGAGGG CGTCGTCGAC GTCGTCGACA CCGAGCGCCA CGAGCGGATC
GGCGCGATCG ACGCCGGCCC GGACGCCCGG GTGCAGGGCG TCGCGCTCTC GCCGGACGGG
GACAGGGGAT ACGCGGTCGA CCAGCGCGGC GCGCGGGTTG TCGCCTTCGA GACCGGTGAC
AATTCGGGTT CTCTCTCCGT CGAAGAGCCG ATCCACGCCG AGGCCGCGGT CGGCGCCGAC
CCGTACGACC TCGTCGCGAC CGGTGACCGG GTGTTCGTCC CCGGCCGCGG CGACGGTGTC
GTCCACGAGT TCGACCGGGA GTTGGATCCG ATCGCGGTCC ACGACGGGTT CTCCCGCCCT
GTCGACGTTC TCGAAGTCGC CGACGACTGG TGGGTGCTTG ACGCGAGCGC CCCGCGACTT
CGGTCGCTCG ACGGCGCGGT CGTCGAGACG TCGGCGCCCG GACTGGTCGC AACCCCTGTG
AGTGGCGGTC GAATCGCCAT CTCGCACTAC GACGACGACC GCGTCTCTCT CGTCGACGTC
GAGTCAGGGA CCGTCTGGAC GGCGAAATCG CCGGCGTACC CGTTCGGATC GGTCGTGGTG
TGA
 
Protein sequence
MTGWDKQSDA PSPADRVLAV PCEGDDLLAL FALDTGERLG EVPVGSHPVH ATTCRGRTVV 
ATMGDRAVTA VDASGEVTQI ETGVLGPSHF AAANGELYVS CSAGDALAVI DSERLTLVDR
VAVGAEPHEV AVAPDGDRLY SGSRREGVVD VVDTERHERI GAIDAGPDAR VQGVALSPDG
DRGYAVDQRG ARVVAFETGD NSGSLSVEEP IHAEAAVGAD PYDLVATGDR VFVPGRGDGV
VHEFDRELDP IAVHDGFSRP VDVLEVADDW WVLDASAPRL RSLDGAVVET SAPGLVATPV
SGGRIAISHY DDDRVSLVDV ESGTVWTAKS PAYPFGSVVV