Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1253 |
Symbol | |
ID | 7399521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1263283 |
End bp | 1266108 |
Gene Length | 2826 bp |
Protein Length | 941 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643708317 |
Product | ATP-dependent helicase |
Protein accession | YP_002565915 |
Protein GI | 222479678 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAAC TCACGGACAG CGGCTCGGAC GGGGAGGGTG GTGCCGAGCC GTCGGCGCGA GCGCTCCTCC GCGAGGCGCT CGCGGGCGAG GACGCGCCCG CCGTCGAATT CGACCCGGAG ACGGTCCCGA TATCCGACGC CGACGTGCTC GACCGGCTCT CGCCGCCGGT CCGCCGCTGG TGGGTCTCGG AGTTCGCGGC GCACGTCGGC GAGAACGGCG GTCTGTTCAC GCCGCCACAG CGAGGGGCGA TTCCCCGCGT CGACGACGGG GAGAACTGCC TCGTCGCCGC GCCGACGGGG AGCGGGAAGA CGCTCGCCGC CTTCACCGCG GTCCTCGACG ACCTCTTCGC GCGCGATCGG GCCGGAACGC TGGACAACTC CGTCTACTGT CTGTACGTCT CCCCGCTGAA GTCGCTCGCG AACGACATCG AGCGGAACCT CGAAGCGCCG CTCAATGGGA TCGCAGCGGA AATGACCGCT GCGAGCGAGA GCGACGAAGA CGAAGAAGTC GATCCCGGCG TCCGCCAAGC GATCCGCCAC GGCGACACGA GCAAGGCCGA CCGGCGGGCG ATGCTGGAGG AGACGCCGCA CGTGCTCAAC ACCACGCCGG AGACGCTGGC GATCCTGCTC AACGCCCCAC GGTTCAGGGA GAAGCTCCGC ACCGTCGAGT ACGTCGTCGT CGACGAGATC CACGCGCTGG CCGGGAACAA GCGCGGGACC CACCTCTCGG CCTCGCTGGA GCGACTGACG GAAATCGCCG ACGATTCTCC GACCCGGATC GGCTGTTCCG CGACGGTCGA GCCGCTCGAC GAGGTCGCCG ACTTCCTCGT CGGCTGCGAG CGCGTCGCCG GCGAGGTGGG CGACCCGGAC GGCTTCGCCC CCCGCGACTG CGAGGTCGTG GACGCCAGGT TCGGCCGCGA GTTCGATCTG CAACTCCGAA CGCCGGCGGC CGACCTCATC CACACACCTG ATTCGGTCGT CACCGACCGG TTCTACGACG CGCTCCACGG GCTGATCGAG GACCACGAGA ACACGCTAGT GTTCGCGAAC TCGCGGTCGG GCGCCGAACG CACCCTTCGA GAGCTTCGCG AGCGGTTCGG CTACGACGAG TCGGACTCGG GCTGTCACCA CGGGAGCCTC GGCGAGGCCC AGCGTACTCG GATCGAGGAG GGGCTGAAGG CGGGCACGCT GGACGTGGTG ACCACGTCGA CGAGCCTCGA ACTCGGTATC GACATGCCGC ACCTCGATCT GGTCGTGCAG GTGGGGTCGC CGAAGTCGGT CGCGGCGCTG CTCCAGCGCG TCGGGCGGGC GGGCCACAGC CCCGGCGAGA CCGTCGAGGG GCGGATGTTC GCGCTCGACC GCGACGAGCT GGTCGAGTGC GCGGCGATGC TCGCCCGCGC CGAGGAGGGG TTCGTCGACG GCGTGTCGCT CCCCGAGGGA GCTGCCGACG TGGCCGCCCA ACACGTCTAC GGGATGGCGA TCAATCAGAT CCGCCCCGAC CGGGAGATCC GCGAAGTTCT CCGGCGCGCG CACCCGTACC GCGAGTTCGG GACCGGCGAG TACGAGCGAC TCATGCGGTA CCTCACCGGC GACTACGAGG GGCTGGCGGA GCGGAACGTC TACCCGAAGG TGTGGCGCGA TGCGAACGAC CCGCCGGACG GCGAACACCA CCACGAGGAG TATCCGGTCG GGGAGACGCT CGTCGGGAAG CGCGGCCGGC TCGCGCGGGT CATCTACATG ACCAACGTCG GGACGATCCC GGACTCGTTC GGCTGCGACG TGGTCACCCG CGACGGCGAG GCGGTCGGGA CGCTCGACGA GAACTACCTC GACACGCTCG CGCCGGGCGA CGTGTTCGCG CTGGGCGGCG AGCGGTTCGC GTTCCGCTAC CGCCGCGGCT CAAAGGTGTA CGTCGACCGG ACCGGCGAGC GCCCGACGGT CCCCACGTGG TACGCCGAGC GGCTCCCGCT GTCGGCCGAT CTGGCGGCGG AGGTGCTCGC GTTTCAGGCC GACCTGCTCG ACCGACTGGA GCGCGGCGGT CCCCCCGCGG TCCGCGCGTG GCTGCGCGAG CTTCCGATCG ACGGGAACTC GGTGCGGGCG ATCACTCGGA CCTACGACGA GCAGGTCGCG TATGCGGGCG CGGAGAGCGT GTCGACCCCG TCGCGGCTCG CCGTCGAGGA GGTGCTCGAC CGCGACGCGT ACAAGCGTCG GTTCCACGTC CACGCGACGT ACGGCCGGCG GTTCAACGAG GGGCTCTCGC GGCTGGTCGC CGCCGAATGC GCGGCCCGAA CCGACGCCGA TCCGACGGTC GCGGTCGCCG ACCGTGGGTT CAGCCTCGCG CTCCCGTTGA ACCGCAAGGT CGACGTAGCG GGGGTCATCC GCGAGCTGGA CCCCGAAACG GTCCGCGAGG ACCTCCGGGC GGCGCTGCGG GGGACCGACC TCCTCCAGCG CTACTTCCGG ATCAACGCGA CGCGCTCGCT CATGATCCTC AAGCGGTACA AGGGGTACGA GAAGTCGGCC GCCGAACAGC AGGTGTCCGC GGAGACGCTG CTATCGCTCG CGGAGGGGCT CGACGACTTC GCGGTGATCG AGGAGACGTA CCGCGAGCTG TTAGACGACC GGCTCGACGC GCCCCGTATC CGAAAGGTGG CAGAGCGGAT CGACGACGGC GACCTCGCAG TCGCCGACCA GACGGTCGAC TCGCCGACTC CCCTCGCGTT CGGGCTCGCG ACGCTCGTCG ACTCGGACGC GGTGCTCGCG GGCGACGAGT CGGCGACGCT CCGGAAGTTC CACGACCGGG TGCGGGCGGC GATCGACGAT TCTTAA
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Protein sequence | MSELTDSGSD GEGGAEPSAR ALLREALAGE DAPAVEFDPE TVPISDADVL DRLSPPVRRW WVSEFAAHVG ENGGLFTPPQ RGAIPRVDDG ENCLVAAPTG SGKTLAAFTA VLDDLFARDR AGTLDNSVYC LYVSPLKSLA NDIERNLEAP LNGIAAEMTA ASESDEDEEV DPGVRQAIRH GDTSKADRRA MLEETPHVLN TTPETLAILL NAPRFREKLR TVEYVVVDEI HALAGNKRGT HLSASLERLT EIADDSPTRI GCSATVEPLD EVADFLVGCE RVAGEVGDPD GFAPRDCEVV DARFGREFDL QLRTPAADLI HTPDSVVTDR FYDALHGLIE DHENTLVFAN SRSGAERTLR ELRERFGYDE SDSGCHHGSL GEAQRTRIEE GLKAGTLDVV TTSTSLELGI DMPHLDLVVQ VGSPKSVAAL LQRVGRAGHS PGETVEGRMF ALDRDELVEC AAMLARAEEG FVDGVSLPEG AADVAAQHVY GMAINQIRPD REIREVLRRA HPYREFGTGE YERLMRYLTG DYEGLAERNV YPKVWRDAND PPDGEHHHEE YPVGETLVGK RGRLARVIYM TNVGTIPDSF GCDVVTRDGE AVGTLDENYL DTLAPGDVFA LGGERFAFRY RRGSKVYVDR TGERPTVPTW YAERLPLSAD LAAEVLAFQA DLLDRLERGG PPAVRAWLRE LPIDGNSVRA ITRTYDEQVA YAGAESVSTP SRLAVEEVLD RDAYKRRFHV HATYGRRFNE GLSRLVAAEC AARTDADPTV AVADRGFSLA LPLNRKVDVA GVIRELDPET VREDLRAALR GTDLLQRYFR INATRSLMIL KRYKGYEKSA AEQQVSAETL LSLAEGLDDF AVIEETYREL LDDRLDAPRI RKVAERIDDG DLAVADQTVD SPTPLAFGLA TLVDSDAVLA GDESATLRKF HDRVRAAIDD S
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