| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1247 |
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| Symbol | |
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| ID | 7399515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1257875 |
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| End bp | 1259662 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643708311 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_002565909 |
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| Protein GI | 222479672 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.853909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC AGCAGCCGCG GTCGGAGGGA GACGGCTCCC GAGGCCGCGA CGACGCGGAC
CGGTTCGCGG GCGAGAAGGA CGAGAACCTG CGGAGCAGAG ACGTGACGGA GGGGGCGGAC
AAGGCCCCGC ACCGGGCGAT GTTCCGGGCG ATGGGGTTCG ACGACGAGGA CCTCTCCTCG
CCCATCATCG GCGTGCCGAA CCCGGCGGCC GACATCACGC CGTGTAACGT CCACCTCGAC
GACGTGGCGG ACGCCGCGAT CGAGGGGATC GACGCGGCGG GCGGGATGCC GATCGAGTTC
GGGACGATCA CCATCTCCGA CGCCATCTCG ATGGGGACCG AGGGGATGAA GGCGAGCCTC
ATCTCCCGCG AGGTGATCGC CGACTCCGTC GAGCTGGTCT CCTTCGGCGA GCGGATGGAC
GCGCTGGTGA CGGTGGCGGG CTGTGACAAG AACCTACCCG GCATGCTGAT GGCCGCGATC
CGCACCGACC TCCCGTCGGT GTTCCTCTAC GGCGGCTCGA TCATGCCCGG CCAGCACGAC
GGCCGCGACG TGACCATCGT GCAGGTGTTC GAGGGGGTCG GCGCCTACGC CGAAGGCGAC
ATGAGCGGCG AGGAGCTCGA CGATCTGGAG CGGCACGCCT GCCCCGGCGC GGGCTCCTGT
GGCGGGATGT TCACCGCCAA CACGATGGCC TCTATCGCCG AGGCGCTCGG GATGGCCCCG
CTCGGCTCCG CCTCCGCGCC CGCCGAGAAC CGGGAGCGCT ACGAGGTCGC TGAGCGCGCC
GGCGAACTCG CCGTGGACTG CATCGAGAAC GACCGCCGTC CCTCCGACAT CCTCTCGCGG
GAGTCGTTCG AGAACGCGAT CGCGCTCCAG ACCGCCATCG GCGGCTCCAC AAACGGTGTC
CTCCACCTCC TCGCGCTGGC CGCGGAGGCC GACGTGGACC TCTCGATCGA GGACTTCGAC
GAGATCTCGC GGCGCACGCC GAAGATCGCG AACCTCCAGC CCGGCGGGAG CCGCGTCATG
AACGACCTCC ACGAGATCGG CGGCGTCCCC GTTGTACTCC GACGCCTCTT GGAGGCCGAC
CTGCTCCACG GCGACGCGAT GACCGTCACC GGACGCACCC TCGCCGAGGA GCTGGCGGAG
TTGGAGGACC GCGGCGCGCT CCCGGACGAC GACGAGATCG AGGCGGACTT CCTCTACACC
GTCGACGACC CCAAGCAGGC GGAGGGCGCC ATCAAGATCC TCGACGGCAA CCTCGCGCCC
GAGGGCGCCG TCCTGAAGGT GACCGGCGAC GACGCCTTCT ACCACGAGGG GCCGGCGCGG
ATCTTCGAGA ACGAGGAGGA CGCGATGGAG TACGTTCAGT CGGGCGCGAT CGACTCCGGC
GACGTGATCG TGATCCGCAA CGAGGGGCCG ACCGGCGGCC CGGGAATGCG CGAGATGCTC
GGCGTCACCG CCGCCGTCGT CGGCGCGGGC CACGAGGAGG ACGTGGCGCT GCTCACGGAC
GGCCGCTTCT CGGGCGGGAC CCGCGGCCCG ATGATCGGCC ACATCGCGCC CGAGGCGGCC
GACGGCGGCC CGATCGGGCT CATCGAGGAC GGCGACCACG TCACCGTCGA CATCCCGGAG
CGCGACCTCA CGGTCGACCT CTCCGAGGAG GAACTGGCCG AGCGCCGCGA GGAGTGGGAG
GCGCCGGCGC CCCAGTACGA GGGCGGCGTC CTCGCGAAGT ACGCGCGCGA CTTCGCCTCC
GCCTCCGACG GCGCGGTGAC GAACCCGCGG CTCACGCGGG ATTTATAA
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| Protein sequence | MSEQQPRSEG DGSRGRDDAD RFAGEKDENL RSRDVTEGAD KAPHRAMFRA MGFDDEDLSS
PIIGVPNPAA DITPCNVHLD DVADAAIEGI DAAGGMPIEF GTITISDAIS MGTEGMKASL
ISREVIADSV ELVSFGERMD ALVTVAGCDK NLPGMLMAAI RTDLPSVFLY GGSIMPGQHD
GRDVTIVQVF EGVGAYAEGD MSGEELDDLE RHACPGAGSC GGMFTANTMA SIAEALGMAP
LGSASAPAEN RERYEVAERA GELAVDCIEN DRRPSDILSR ESFENAIALQ TAIGGSTNGV
LHLLALAAEA DVDLSIEDFD EISRRTPKIA NLQPGGSRVM NDLHEIGGVP VVLRRLLEAD
LLHGDAMTVT GRTLAEELAE LEDRGALPDD DEIEADFLYT VDDPKQAEGA IKILDGNLAP
EGAVLKVTGD DAFYHEGPAR IFENEEDAME YVQSGAIDSG DVIVIRNEGP TGGPGMREML
GVTAAVVGAG HEEDVALLTD GRFSGGTRGP MIGHIAPEAA DGGPIGLIED GDHVTVDIPE
RDLTVDLSEE ELAERREEWE APAPQYEGGV LAKYARDFAS ASDGAVTNPR LTRDL
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