Gene Hlac_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1246 
Symbol 
ID7399514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1256953 
End bp1257819 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID643708310 
ProductMethyltransferase type 11 
Protein accessionYP_002565908 
Protein GI222479671 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.476258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACG ACGTCAGTGC GGAGGGTGGC GAGATCGACG CGGCAGAACA GCGACACGCC 
GTTCGCGAGC GGTACAGCGA CATCGCGACG GAGGGATCGT CGTCATCGTG TTGCGACGGC
GACGTCGACG CCGCCGGAGA CACAGGCGGC TCGACGGCCT GCTGCGGCGA CACGGCACCG
GAGTCGATGA CCCCCGAGGA CGAGTCCCGC AGACTCGGCT ACGACGAGGA CGACATCGAC
GCCGTCGCGT CCGGGGCGAA CCTCGGACTC GGCTGCGGGA ACCCGACGGC GATCGCGAGC
CTCGAACCCG GCGAGACCGT CCTCGATCTG GGCTCGGGCG GCGGGTTCGA CTGCTTCCTC
GCGGCGCGGG AGGTCGGGCC CGACGGCCGC GTCATCGGCG TCGACATGAC CCCCGAGATG
GTCGAGCGGG CTCGCGAGAA CGTCGAGAAG AACGACGCCG ACACCGTCGA GTTCCGCCTC
GGCGAGATCG AGCACCTCCC GGTCGCCGAC GAATCCGTCG ACGCGATCAT CTCGAACTGC
GTGATCAACC TCTCGCCGCG GAAGCCGCAG GTGTTCCGCG AGGCGTTCCG CGTCCTCGGT
CCCGGCGGAC GGCTCGCGGT CTCCGACGTC GTTCAGACCG CACCGTTCCC CGACGACGTA
CGGCTCGACC CGTCGTCGGT CTCGGCCTGC GTCGCCGGCG CCGCGACCAT CGACGAAGTC
GAGTCGATGC TCACGGACGC GGGGTTCATC GAGATCGCGA TCGATCCGAA AGCCGAGAGC
GAGGCGTTCA TCCGTGACTG GGACGACGAC CGCGACCCGA GCGAGTACGT CGTCTCGGCG
ACGATCGAAG CGCGAAAACC GCGGTGA
 
Protein sequence
MTDDVSAEGG EIDAAEQRHA VRERYSDIAT EGSSSSCCDG DVDAAGDTGG STACCGDTAP 
ESMTPEDESR RLGYDEDDID AVASGANLGL GCGNPTAIAS LEPGETVLDL GSGGGFDCFL
AAREVGPDGR VIGVDMTPEM VERARENVEK NDADTVEFRL GEIEHLPVAD ESVDAIISNC
VINLSPRKPQ VFREAFRVLG PGGRLAVSDV VQTAPFPDDV RLDPSSVSAC VAGAATIDEV
ESMLTDAGFI EIAIDPKAES EAFIRDWDDD RDPSEYVVSA TIEARKPR