| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1240 |
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| Symbol | gcvT |
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| ID | 7399508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1252785 |
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| End bp | 1253957 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643708304 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | YP_002565902 |
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| Protein GI | 222479665 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.199307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACC GACGCACCCC TCTCCACGAG GTCCACGAGG AACGCGGCGC GAAGTTCACC
GATTTCGGCG GGTGGCAGAT GCCCGTCGAG TTCGCGTCGA TCAGCGAAGA ACACGCGGCG
GTCCGCGACT CGCTCGGCGT CTTCGACGTG TCGCACATGG GCGAGATCGA GGTATCGGGG
CCGGACGCGA CGAGGCTGAT GAACCGCCTC ACGACCAACG ACGTAACCGC GCTCGACCCG
GGCGACTCCC AGTACGCCGC GATCACGAAC GAGGACGGCG TCATGCTCGA CGACACGGTC
GTCTACCGAC TCCCGGACGG GATCGAGGCG GGCGACGGCG CCGGCGCGCT CGCCGGACTC
GACCGCGACC TCGACGCCGG CGCCGGCGAC CCCGCGTACC TCTTCGTGCC CAACGCCGGC
CACGACGAGC AGATGTACGA CCGGTGGGTC GACTACCGGG ACAGCGAGGG GATCGACGCC
GCGGTCGCGA ACGCGACCGA CGACTGGGCC ATGCTCGCGG TGCAGGGGCC GGACGCGGCC
GACGCCCTCG ATGACGCGAC CCCGACTGAC CGAGTCGTCG ACCTCTCGAA GTTCGAGGCG
ACGGTCGCCG CCGTCGACGA GGTCGACAGC TGGGTCGCCC GGACCGGCTA CACCGGCGAG
GACGGTTTCG AGGTGATGTG TCCGGCCGGC GACGCCGAGA CCGTCTGGGG GGCGTTCGTT
GATGCGCCGC GCGACGCCCA GCCCTGCGGG CTCGGCGCGC GCGACACCCT CCGGATCGAG
ATGGGCTTTC TCCTCTCCGG GCAGGACTTC GACCCCGAGA CCGAGCCGCG GAGCCCCTAC
GAGGCCCGGA TCGGGTTCAT CGTGAAGCTC GACACGGAGT TCGTCGGCCG TGACGCCCTC
GAAGCCCAGA AAGAGGAGGG CGTCGACGAG CAGTTCGTCG GGATCCGCCT GCTCGAACGC
GGCGTCCCCC GAAACGGATA CGCCGTCACC GACGGCGATC TCACGCGGAT CGGCCAGCTG
ACCTCCGGTA CGATGAGCCC CACCCTCGAC GAGCCGATCG GGTTGGGGTA CCTCCACGAG
CGCTACGTCG AACCGGGCAC CGAGGTGAGC GTCGTCGTGC GCGGTGACGA GAAGCGCGCC
GAGGTCGTGA TCCCGCCCTT TATCGACCGG TAG
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| Protein sequence | MSDRRTPLHE VHEERGAKFT DFGGWQMPVE FASISEEHAA VRDSLGVFDV SHMGEIEVSG
PDATRLMNRL TTNDVTALDP GDSQYAAITN EDGVMLDDTV VYRLPDGIEA GDGAGALAGL
DRDLDAGAGD PAYLFVPNAG HDEQMYDRWV DYRDSEGIDA AVANATDDWA MLAVQGPDAA
DALDDATPTD RVVDLSKFEA TVAAVDEVDS WVARTGYTGE DGFEVMCPAG DAETVWGAFV
DAPRDAQPCG LGARDTLRIE MGFLLSGQDF DPETEPRSPY EARIGFIVKL DTEFVGRDAL
EAQKEEGVDE QFVGIRLLER GVPRNGYAVT DGDLTRIGQL TSGTMSPTLD EPIGLGYLHE
RYVEPGTEVS VVVRGDEKRA EVVIPPFIDR
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