| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1238 |
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| Symbol | |
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| ID | 7399506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1249702 |
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| End bp | 1251867 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643708302 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002565900 |
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| Protein GI | 222479663 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.768724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0266527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACTG AGGGAGACGA GCCGGTGAAG ACCATCTGCC CGTACTGCGG CGTCGGCTGC
GGGATCAAAG TGAACCAGGG CGACGACCCC GGCGACGTGA GTTTCATGCC GTGGGGGGAG
GCGCCGGTCA ACGAGGGGCG GGTGTGTATC AAGGGCGGCG CGGCGACGCA GGTCGTCGAC
CACGAGGACC GCCTGACGGA GCCGCTGATA AAGGAAGATG GCGAGTTCCG CGAGGCGACG
TGGGAGGAAG CCTACTCGCG GATCGTCTCG GAGATGGAGC GGATCCGCGA CGAGAACGAC
CCAGACGCGA TGGGATTCTT CGGCTCCTCG AAGACGATGA ACGAGGAGAA CTACCTCCTC
CAGAAGATCG CGCGCCGATA CGGCACGAAC AACGTCGACA ACTGCACGCG GATGTGCCAC
GCCTCGACGG TGTGGGCGCT CCGGAGGAGC TTGGGGGCGG GCGCGATGAC GAACAGCATG
GTCGACCTAG AGGAATCGGC CGACGTGTTC TGGATCCAAG GGGCGAATCC CGGCGAACAA
CACCCGATCG CCAACAGCCA GTACTTCCGG CAGGCCGTCT TGGAGGGTGC GACCGTCATC
CAGGTCGACC CGCACGCCAA CAAGACCACC CGGTCGTTCA AGATCGGCGA GACCGACCGG
CACATGCACC TTCAGGTGAA CCCCGGCGCC GATATTCCCC TGCTCAACAT CGTCTTGAAG
ACGATCCTTG AACGCCACGA GGAAGAGCCG GACGCGGGCT GGATCGACGA GGCGTTCATC
GACGAGCGCA CCGAGGGGTT CGATCACTTG AAAGAGACCC TCGAAGACTT CGACAAGGAG
GCGGCCGCGG AGGAGGCCGG CGTCCCCCTC GAAGACATCG AACTCGCCGC CGAGAAGTAC
GCGATGGCGA ACAACGCCGC CATCTTCACC GGGATGGGGA TGAGCCAGCA CACCTGCGGC
GTCGACAACG TGCAGAACGA GATCAACCTC GCGCTGATCA CTGGGAACCT CGGGAAGCCC
GGCACCGGCG TCAACCCGCT TCGTGGACAG AACAACGTCC AAGGGACCAG CGACGTGGGT
GCGATGCCGA ACGTCCTCCC CGGCTACCAG CCCGTCAACG ACGACGAGGC CCGCGGGAGC
GTCGAGGACG TGTGGGGGTT CGAGGTGCCC GACGAGCCCG GGCTCACCAA CGTGGAGATT
TCCCACGAGG CGGGTCACTC GGTGAAGGGG CTGTACGTGA TGGGCGAGAA CCCGATCATG
AGCGAGCCCG ACGGCAACGA GGTCGAAGAG CGCTTGAAGT CGCTGGAGTT CATGGTCGCA
CAGGACATCT TCATGACCGA GACCGCGGAG TTCGCGGACG TGGTCCTCCC GGCGACGACG
TGGGCGGAAC GCGGCGGCAC AGTCACCAAC ACCGACCGCC GAGTCCAACG CATGCGCGGC
GCCGAGATGG TCCACGAGAA CACGAAACAC GACCTCGACA TCCTGATGGA GGTCGGGAGC
CGCCTCTTTA GCGAAGACGA GTTCCGCTTC GACGACGTGG AGGCCGTCTT CGAGGAGCTG
CGCGAGGTGT GTCCGATCTA CCACGGGATG ACCTACGACG CGCTCGGCGA GACCGGGATC
CAGTGGCCCT GCTACGAGGA GGGCGACCAG GGCGACCAGT ACCTCTACGA GGACTCCTTC
GACACAGAGA GCGGGCTCGG ACATATCGAG GGCGTCCGCC ACCAGCCACC GGCGGAGGTG
CCCGACGAGG AGTACCCGCT GATCCTCACC ACTGCGCGGC TCGAAGAGCA CTACAACACG
GGGACGATGA GCCGGCGCTC GCCGACGCTG ATGCGACAGC ACCCGGAGAA CTTCGTCGAC
GTGCACCCGA ACGACGCCGA AGAGTACGGG ATCGAGGACG GCGACATGGT GACGCTCCGG
TCGCGACGCG GCGAGATCGA AGTGAAAGCG CAGGTGACCG AGGACATCAA GGAGGGCGTC
GTCTGGACGA CGCCGCACTT CGCGGCCGCC TCCGCGAACC GGCTCACGAA CGACGTGCTC
GACGAGCGGG CGAAGATACC CGAGTACAAG GCCGCGGCGG CGGACATCGC GGTCACCGTC
TCTGACGGCG GGGAACGCGT GGACGACGCT GAGCCCGACG CGGGTTCGGA GCCGGGCGAC
GACTGA
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| Protein sequence | MSTEGDEPVK TICPYCGVGC GIKVNQGDDP GDVSFMPWGE APVNEGRVCI KGGAATQVVD
HEDRLTEPLI KEDGEFREAT WEEAYSRIVS EMERIRDEND PDAMGFFGSS KTMNEENYLL
QKIARRYGTN NVDNCTRMCH ASTVWALRRS LGAGAMTNSM VDLEESADVF WIQGANPGEQ
HPIANSQYFR QAVLEGATVI QVDPHANKTT RSFKIGETDR HMHLQVNPGA DIPLLNIVLK
TILERHEEEP DAGWIDEAFI DERTEGFDHL KETLEDFDKE AAAEEAGVPL EDIELAAEKY
AMANNAAIFT GMGMSQHTCG VDNVQNEINL ALITGNLGKP GTGVNPLRGQ NNVQGTSDVG
AMPNVLPGYQ PVNDDEARGS VEDVWGFEVP DEPGLTNVEI SHEAGHSVKG LYVMGENPIM
SEPDGNEVEE RLKSLEFMVA QDIFMTETAE FADVVLPATT WAERGGTVTN TDRRVQRMRG
AEMVHENTKH DLDILMEVGS RLFSEDEFRF DDVEAVFEEL REVCPIYHGM TYDALGETGI
QWPCYEEGDQ GDQYLYEDSF DTESGLGHIE GVRHQPPAEV PDEEYPLILT TARLEEHYNT
GTMSRRSPTL MRQHPENFVD VHPNDAEEYG IEDGDMVTLR SRRGEIEVKA QVTEDIKEGV
VWTTPHFAAA SANRLTNDVL DERAKIPEYK AAAADIAVTV SDGGERVDDA EPDAGSEPGD
D
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