| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1227 |
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| Symbol | |
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| ID | 7399495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1236988 |
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| End bp | 1238127 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643708292 |
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| Product | ABC transporter related |
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| Protein accession | YP_002565890 |
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| Protein GI | 222479653 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000640126 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCTCG AACTCGACGG ACTGAGTCAT CGGTACAGGA GCGAGCGTGC CCTCGACGAC
GTGTCGCTCG CCCTCAACGA TGGAGAGCTC GTCGCGCTGC TCGGGCCGAG CGGCTGCGGG
AAGACGACCG TCGTCCAAGC GATCGCCGGG CACCTCGACC CGACGGCCGG TCAAGTATCA
CTCCGCGGGG CCGATGTCAC CGGTGTCCCG CCGGAGGACC GGAACGTCGG GATCGTCTTT
CAGCGATCGA CGCTGTACCC GCACATGACC GTCGGCGAGA ACGTCGCGTA CGGACTGCAA
AGCGGAGATC TCACGGCAGA CCGAGTGAGC CAGCGTGTCG ACCGGTACCT CGAACTGGTC
GAACTCGCCG ACCGACGTGA TGCGTCTCCG GAGTCACTGA GCGGGGGCGA GGCCCGCCGC
GTCGAACTCG CCCGCGCCCT CGCTCCCGAA CCGGACGTCC TCCTGCTCGA CGAGCCGTTG
TCGGCGCTCG ACAAGGGGCT CAGAGCGCGA CTCCGCGAGG AGATCGTCCG CATCCAGCGG
CAGACCGGCG TGACGACGCT GTTCGTCACC CACGATCAGG AGGACGCGAT GTCGGTCGCG
GACCGGCTCG TCGTCCTCCG CGATGGGGCG ATCGTCGCGG CTGGAGCACC TCGGCAACTC
TACGAATCGC CGCCGGCCCG CTTCGTCGCG TCGTTTCTCG GGCGCTCGAA CGAGCTCTCG
GCGACTGTCG ACGGCGACGG GTCGACGGCG ATGAGGATCG GCGGGACCGA AGTCGATCTC
GACGCCGTAC CGGGCGAGGT TGCCGACGCG CCTCGAGCCA TCGTGCACAT CCGACCGGGC
GACCTGACGG TCAACCCCGC GACGCTGTCC AATAGGAGGT CGAACGACGC CGGTACCGCG
CCAGATCGAT CGGACGCGTC GGCTGATGGG GAGCGGTCCG ACAACCGAAC GAAAACGATC
GAGATGCGAG GGACGGTAAC ACACGTTCGT GACGTGGGAC GCCGCTACGA CGTCCGCGTC
GAGGTCGACT CCGGCGAGGA GGTGACCGTC GAGCGGCATC GCGACGGGCT CGGTGAGGCC
GATCGCGTGA CCGTTGCCGC CGCGGCGAGC GACCTCACGG TGTTTCCCGT CTCGAAGTGA
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| Protein sequence | MTLELDGLSH RYRSERALDD VSLALNDGEL VALLGPSGCG KTTVVQAIAG HLDPTAGQVS
LRGADVTGVP PEDRNVGIVF QRSTLYPHMT VGENVAYGLQ SGDLTADRVS QRVDRYLELV
ELADRRDASP ESLSGGEARR VELARALAPE PDVLLLDEPL SALDKGLRAR LREEIVRIQR
QTGVTTLFVT HDQEDAMSVA DRLVVLRDGA IVAAGAPRQL YESPPARFVA SFLGRSNELS
ATVDGDGSTA MRIGGTEVDL DAVPGEVADA PRAIVHIRPG DLTVNPATLS NRRSNDAGTA
PDRSDASADG ERSDNRTKTI EMRGTVTHVR DVGRRYDVRV EVDSGEEVTV ERHRDGLGEA
DRVTVAAAAS DLTVFPVSK
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