| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1226 |
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| Symbol | |
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| ID | 7399494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1236170 |
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| End bp | 1236991 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643708291 |
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| Product | NifC-like ABC-type porter |
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| Protein accession | YP_002565889 |
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| Protein GI | 222479652 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0555] ABC-type sulfate transport system, permease component |
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| TIGRFAM ID | [TIGR01581] NifC-like ABC-type porter |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000058663 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTCTCG TCGATGCGAC CCGCTCGGCC ACGAGATCTC GGCGACTGTC GCCGCTGTTG
GTCTTCGGCG TCCTCGGGGG AATCCTGCTC GTCTACTTCG CGCTCCCCTT CGTGGTGTTT
CTCGGCAGAA CCGGATCGGT TCCCGTCGCC GAGACCCTCT CCCAGACAGC GAGCCGGACG
GCGGTCCGGA ACTCGCTTCT CACCGCGCCG GTCGCCACCG CGATCGCGAC CGTCCTCGGC
GTTCCACTCG CGTACGTCCT CGCTCGCGAG ACGTTCCCGG GGAAGCGGCT CATCGAGGCG
CTCGTCGTGC TCCCGCTCGT CGTCCCACCG GTCGTCGGCG GGGCGATGCT GCTCAGCGTG
GTGGGCCGGT TCACGCCGAT CGGGGCCGCC GCGACGCGCG TCGGAGTACC GCTGACGGAC
AGTCTCCTCG GCGTCGTCCT TGCACAGACG TTCGTCGCCG CGCCGTTCGT GGTGATCACC
GCTCGCGCCG GGTTCGGCGC CGTCGACGAG CGCCTCGAAC AGGCGTCCCG ATCGCTCGGA
TACGGGCCGT TAGCCACCTT CAGACGCGTG TCGCTTCCCC TCGCGAGCCG AGCGATCGTC
GCCGGCGTCG TACTCACGTT CGCGCGAGCC ATCGGCGAGT TCGGCGCCAC GATGATGGTC
GCGTACAACC CTCGGACGAT GCCGACGCGC ATCTGGGTCG ACTTCATCGC CGGCGGTATC
GACGCGATCG TCCCGCTCGC GCTCGCCCTG CTGGCGATCA CGCTCGTCGT GGTCGTCACG
GTACAACGGT TCGCCGGGGT TCCGACCGTG GTGGAGCGAT GA
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| Protein sequence | MSLVDATRSA TRSRRLSPLL VFGVLGGILL VYFALPFVVF LGRTGSVPVA ETLSQTASRT
AVRNSLLTAP VATAIATVLG VPLAYVLARE TFPGKRLIEA LVVLPLVVPP VVGGAMLLSV
VGRFTPIGAA ATRVGVPLTD SLLGVVLAQT FVAAPFVVIT ARAGFGAVDE RLEQASRSLG
YGPLATFRRV SLPLASRAIV AGVVLTFARA IGEFGATMMV AYNPRTMPTR IWVDFIAGGI
DAIVPLALAL LAITLVVVVT VQRFAGVPTV VER
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