Gene Hlac_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1215 
Symbol 
ID7399483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1225266 
End bp1226369 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content69% 
IMG OID643708280 
ProductRadical SAM domain protein 
Protein accessionYP_002565878 
Protein GI222479641 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.154309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000759697 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCGACA ACCTCGACAC GGACCGGCGG CCGCTGGTTC TCATCTGGGA GGTGACGCAG 
GCGTGCGGAC TCGCCTGCCG CCACTGTCGC GCCGACGCGA AGCCGGCGCG TCACCCCGAC
GAACTGTCGA CCGAGGAGGG GAAGCGGCTC CTCAACGATG CGGCGACGTT CGGGGACGGC
CAGCTCGTCG TGCTCTCTGG CGGCGATCCG CTCGCCAGAG ACGACCTGCT AGAGCTGGTT
TCGTACGGCG ACGATCAGGG ACTCCGCATG ACGATTACCC CCAGCGGGAC GCAGTCGCTG
ACGGCCGACC GGATCGAGGA TCTCGCTGAC GCCGGGATCC GGCGGATGGC GCTCAGCCTC
GACGGCGCGA CGCGCGAGAG CCACGACCGG TTCCGGGGCG AAGAGAGCTT CGAGAGCACG
CTGGAAGCGG CTGAGGCCGC CTCCGAGGCG GGGCTGCCGC TGCAGATCAA CACAACCGTC
TGCGCGGAGA CGGTCGACGA ACTCCCTGCA ATCCGTGACC GCGTGCGGGA CCTCGGCGCT
GTCCTCTGGA GCGTGTTCTT CCTCGTCGCC GTCGGCCGAG GGCGGATCCT GGAGCCGATC
GCACCGGAGC GTGCTGAAGA TGTGATGGAG TGGCTCCACG GTGTCGCCGA GTCAGAGCCG
TTCGGCGTCA AGACGACTGA GGCGCCGTTC TACCGCCGGG TCGGGCTTCA GTCTGACGGC
GACGAGGAGG CGACCCGGCG GCGCGGCGGG ATCACCGCCG GCCGCGGGTT CGCGTTCGTG
AGCCACACCG GAGAGGCGTA CCCGTCCGGA TTCCTCCCGG AGTCCGCCGG TAACGTCCAC
GATCGGTCGA TCGTCGATAT CTACCGGAAC GGGGACCTGT TCGAGTCGCT CCGCGAGCCG
GACCGGCTGA AGGGGAAGTG CGGTGCCTGC GAGTTCCGCC AAGTATGCGG CGGGAGCCGA
TCGCGAGCGT TCGCGACGAC GGGGGACCCG CTGGAGAGCG ATCCGCTCTG CCCGTACGTG
CCCGACGGAT ACGACGGCGA GCTACCGCCG ACACTCAAGG ACGGATTCGA GGGGTCGACC
AGCGCGCCGG ACGCCGCGGA TTGA
 
Protein sequence
MFDNLDTDRR PLVLIWEVTQ ACGLACRHCR ADAKPARHPD ELSTEEGKRL LNDAATFGDG 
QLVVLSGGDP LARDDLLELV SYGDDQGLRM TITPSGTQSL TADRIEDLAD AGIRRMALSL
DGATRESHDR FRGEESFEST LEAAEAASEA GLPLQINTTV CAETVDELPA IRDRVRDLGA
VLWSVFFLVA VGRGRILEPI APERAEDVME WLHGVAESEP FGVKTTEAPF YRRVGLQSDG
DEEATRRRGG ITAGRGFAFV SHTGEAYPSG FLPESAGNVH DRSIVDIYRN GDLFESLREP
DRLKGKCGAC EFRQVCGGSR SRAFATTGDP LESDPLCPYV PDGYDGELPP TLKDGFEGST
SAPDAAD