Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1215 |
Symbol | |
ID | 7399483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1225266 |
End bp | 1226369 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643708280 |
Product | Radical SAM domain protein |
Protein accession | YP_002565878 |
Protein GI | 222479641 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.154309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000759697 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCGACA ACCTCGACAC GGACCGGCGG CCGCTGGTTC TCATCTGGGA GGTGACGCAG GCGTGCGGAC TCGCCTGCCG CCACTGTCGC GCCGACGCGA AGCCGGCGCG TCACCCCGAC GAACTGTCGA CCGAGGAGGG GAAGCGGCTC CTCAACGATG CGGCGACGTT CGGGGACGGC CAGCTCGTCG TGCTCTCTGG CGGCGATCCG CTCGCCAGAG ACGACCTGCT AGAGCTGGTT TCGTACGGCG ACGATCAGGG ACTCCGCATG ACGATTACCC CCAGCGGGAC GCAGTCGCTG ACGGCCGACC GGATCGAGGA TCTCGCTGAC GCCGGGATCC GGCGGATGGC GCTCAGCCTC GACGGCGCGA CGCGCGAGAG CCACGACCGG TTCCGGGGCG AAGAGAGCTT CGAGAGCACG CTGGAAGCGG CTGAGGCCGC CTCCGAGGCG GGGCTGCCGC TGCAGATCAA CACAACCGTC TGCGCGGAGA CGGTCGACGA ACTCCCTGCA ATCCGTGACC GCGTGCGGGA CCTCGGCGCT GTCCTCTGGA GCGTGTTCTT CCTCGTCGCC GTCGGCCGAG GGCGGATCCT GGAGCCGATC GCACCGGAGC GTGCTGAAGA TGTGATGGAG TGGCTCCACG GTGTCGCCGA GTCAGAGCCG TTCGGCGTCA AGACGACTGA GGCGCCGTTC TACCGCCGGG TCGGGCTTCA GTCTGACGGC GACGAGGAGG CGACCCGGCG GCGCGGCGGG ATCACCGCCG GCCGCGGGTT CGCGTTCGTG AGCCACACCG GAGAGGCGTA CCCGTCCGGA TTCCTCCCGG AGTCCGCCGG TAACGTCCAC GATCGGTCGA TCGTCGATAT CTACCGGAAC GGGGACCTGT TCGAGTCGCT CCGCGAGCCG GACCGGCTGA AGGGGAAGTG CGGTGCCTGC GAGTTCCGCC AAGTATGCGG CGGGAGCCGA TCGCGAGCGT TCGCGACGAC GGGGGACCCG CTGGAGAGCG ATCCGCTCTG CCCGTACGTG CCCGACGGAT ACGACGGCGA GCTACCGCCG ACACTCAAGG ACGGATTCGA GGGGTCGACC AGCGCGCCGG ACGCCGCGGA TTGA
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Protein sequence | MFDNLDTDRR PLVLIWEVTQ ACGLACRHCR ADAKPARHPD ELSTEEGKRL LNDAATFGDG QLVVLSGGDP LARDDLLELV SYGDDQGLRM TITPSGTQSL TADRIEDLAD AGIRRMALSL DGATRESHDR FRGEESFEST LEAAEAASEA GLPLQINTTV CAETVDELPA IRDRVRDLGA VLWSVFFLVA VGRGRILEPI APERAEDVME WLHGVAESEP FGVKTTEAPF YRRVGLQSDG DEEATRRRGG ITAGRGFAFV SHTGEAYPSG FLPESAGNVH DRSIVDIYRN GDLFESLREP DRLKGKCGAC EFRQVCGGSR SRAFATTGDP LESDPLCPYV PDGYDGELPP TLKDGFEGST SAPDAAD
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