| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1207 |
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| Symbol | |
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| ID | 7399474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1216077 |
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| End bp | 1218065 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643708272 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002565871 |
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| Protein GI | 222479634 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1204] Superfamily II helicase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000229661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000914405 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCGTTC GCGATCTCCC GCTCTCGGAG CAGTTCGTCG ATCACTTCGC CGAACAGGGG
ATCCGCGAAC TGTACCCGCC GCAGGCGGCC GCGGTCGACG CCGGCGTCTG CGAGAGCGAG
AACGTCGTCG CGGCGGTGCC GACCGCCTCC GGAAAGACGT TTATTGCCGA GCTAGCGCTG
CTGACCGCCG ACGGACCCGG GCTGTACGTC TGTCCACTCC GCGCGCTCGC CCGCGAGAAG
TACGAGGCGT TCGCGGCGTT GCCGGGCGTC GACGCCGCTA TCTCGACCGG CGACTTCGAC
GCGTCGGGCG AGGCGCTCGC GGGCAACGAC GTGGTGGTCG CCACGAGCGA GAAGGTCGAT
TCCGCGATCC GCAACGGCGC GTCGTGGGTC GACGACCTCG CCTGCGTCGC CGTCGACGAG
GTCCACCTCC TCGGCGCTGA GCGGCGCGGC CCGACCCTCG AAGTGACTCT CGCGACGCTC
CGCCGACGGA ACCCCGAGCT ACAGGTCGTC GCGCTGTCGG CGACCGTCGA TAACCCGGAG
GCGATCGCGG AGTGGCTGAA CGCGACTCTC GTGAAATCCG AGTGGCGCCC CGTCGACCTT
CGCACCGGAG TCGCCGTCGA TGGGGACGTG ACGTTCGACG ACGGAACGAC GATGACGGTC
GATGTCGGGA GCGTCGCTGT GGACGGGAGC GGCGACGGGG ACGACGGCGA CAGCGGTGAC
GCAGACGATC CCCCCGACGA CACCGAGATC ACCGCCGCCC TCGTCGCCGA CGCCGTCGAT
CAGGGCGGAC AGTGTCTCGC ATTCGTTCGG TCGCGGACTG AGGCGGTCGG GCTGGCCGAG
CGGCTCGCGG CCGACGGGCT CGCCGAGCGG CTGGGGGTGG AGTCGGCCGC CGCGGCCGCG
GGCGACGAGG CCGCCGACGT GGACGGCACC GCCACCGGCC GCCAGCTAGC CGACTGCCTG
CGGTCCGGCG TCGCGTTCCA CCACGCCGGA CTCCGGGCCG GCCACCGGAC GGTCGTCGAG
GAAGCGTTCC GCGACCGTGA GGTCGCCTGT ATCTGCGCGA CACCGACGCT GGCCGCCGGC
ATCAATGTCC CCGCGCGGCG GGTCGTGGTC CGCGACCAGA AGCGGTACGC GGGGTCGGGG
ATGGAGTGGC TCCCTACGCT GGAGGTCCAC CAGATGTGCG GGCGCGCCGG GCGTCCGGGG
TTGGATCCGT ACGGGGAGGC CGTGCTCGTT GGGAACCGGG ACACCGAGGG CGACCTCGTC
GAACGGTACC TCGACGGGGA ACCGGAGGCG GTCGAGTCGA AACTCGCCGA CCCGGCGTCG
CTGCGGACCC ACGTCCTCTC GGCGGTCGCG ACCGGGTTCG CGGAGACGGA GGCCGAGATC
CTCGATGTGT TCGAGGGGAC GTTTTACGCC CGGGAGGCCG GCGCCGGTGG GCTGGCCGAC
GCCGTCGGCG TCGCGGTCGA CGACCTCGCG GCGGCCGAGC TGGTCCGCCG GGAGACGGGC
GGGGTCGAGG CGTACCGGCT TGTCGCCACG CCGGTCGGGG AGACGGCCTC GAAGCAGTAC
GTTAGGCCGG AGACCGCCGA ACGGATCGTC TCCGGGCTCC GGACTGCGGC GGGAATGTCG
AACGCGACGA CGCTCACCGT TTTCGAGGTG ATCTGCGACA CGCCCGACAT GCAGGACACC
TACCTCGGCA ACGCAGAGCG TGCTGAAATC TATCGATTCG CGCGGGCGAA CGCGGGGACG
CTGACGACGG CGATGGACGA GACAGATAAT TTCGAGGAGT GGCTGGAGTC GGTGAAGACG
GCGCGGATCC TCGACGAGTG GATCGGCGGT GCGACCGTCG AGGAACTGGT GGAGTCGTAT
CGGATCGGCC CGGGCGACCT CGACTCCCGC GTTGAGCGCG CCGAGTGGCT GTTGAGCGCG
GCCGAGGCGC TCGCCGAGAC GATCGGCGTG CGCGTACCGG CGATCACGAG GGCGCGCTCG
CGACTGTGA
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| Protein sequence | MRVRDLPLSE QFVDHFAEQG IRELYPPQAA AVDAGVCESE NVVAAVPTAS GKTFIAELAL
LTADGPGLYV CPLRALAREK YEAFAALPGV DAAISTGDFD ASGEALAGND VVVATSEKVD
SAIRNGASWV DDLACVAVDE VHLLGAERRG PTLEVTLATL RRRNPELQVV ALSATVDNPE
AIAEWLNATL VKSEWRPVDL RTGVAVDGDV TFDDGTTMTV DVGSVAVDGS GDGDDGDSGD
ADDPPDDTEI TAALVADAVD QGGQCLAFVR SRTEAVGLAE RLAADGLAER LGVESAAAAA
GDEAADVDGT ATGRQLADCL RSGVAFHHAG LRAGHRTVVE EAFRDREVAC ICATPTLAAG
INVPARRVVV RDQKRYAGSG MEWLPTLEVH QMCGRAGRPG LDPYGEAVLV GNRDTEGDLV
ERYLDGEPEA VESKLADPAS LRTHVLSAVA TGFAETEAEI LDVFEGTFYA REAGAGGLAD
AVGVAVDDLA AAELVRRETG GVEAYRLVAT PVGETASKQY VRPETAERIV SGLRTAAGMS
NATTLTVFEV ICDTPDMQDT YLGNAERAEI YRFARANAGT LTTAMDETDN FEEWLESVKT
ARILDEWIGG ATVEELVESY RIGPGDLDSR VERAEWLLSA AEALAETIGV RVPAITRARS
RL
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