Gene Hlac_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1203 
Symbol 
ID7399470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1211170 
End bp1211655 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content70% 
IMG OID643708268 
Productmembrane-flanked domain protein 
Protein accessionYP_002565867 
Protein GI222479630 
COG category[S] Function unknown 
COG ID[COG3402] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000301885 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000403438 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGCCG GGGGTGCGCC GATGACGATG CAGACGCTTC ACCCCCGCGT TCAGGTCGTG 
TGGGTCCTCC GTGCGGTTCT CATCGCCGCG GTGTTGACGG TGCCGTTCGC CGGCGGGGTA
TACCTCAATC GGCTCCCGGA GTGGGCACCG GTTGTCGCCG GCGCGGTCTT CCTCGTGCTT
GGCGTAGGGC ACGCGCTCCT CCGATACCGT CGCTGGAGCT ACGAGATCCG CGAGGACGCG
CTGTACCTCG ACCGCGGCGT GATCACGCAG GTCCGGACGA CGGTACCACT GGTCCGGATT
CAGCACGTCG ACTCCCGTCG CGGTCCCGTC GAGCGCGGCG TCGGGCTCGC CTCCTGCGTG
GTGTACACGG CTGGCTCCCG CGGCGCAGAC GTCCGAATCC CGGGACTCAC GCCCGACGGG
GCGAGCGACC TCCGCGAAGA GCTGAAGCGA CTGGCCATCC GCGCGGACGG GGAGGACGCG
GTGTGA
 
Protein sequence
MHAGGAPMTM QTLHPRVQVV WVLRAVLIAA VLTVPFAGGV YLNRLPEWAP VVAGAVFLVL 
GVGHALLRYR RWSYEIREDA LYLDRGVITQ VRTTVPLVRI QHVDSRRGPV ERGVGLASCV
VYTAGSRGAD VRIPGLTPDG ASDLREELKR LAIRADGEDA V