Gene Hlac_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1200 
Symbol 
ID7399467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1207776 
End bp1208489 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content69% 
IMG OID643708265 
Producthypothetical protein 
Protein accessionYP_002565864 
Protein GI222479627 
COG category[S] Function unknown 
COG ID[COG3361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000395565 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000439593 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGAAC GGCGCGTACT GGAGATGACG TGGCGCGACG GGCTGTTCTG CCACTGGCCG 
GTCGATCCCG CCGTCGTGTC TGGGACGCTT CCCGACAGAC TCTCGGTCGC CACCCATGGG
GGCGACGCGT ACCTGAGCGT CGTCGCCTTC GTGATGGACG ATATCCGCCC GCGTGGGGCG
CCTGTCGGGC TCTCGTTCCC GGAGCTCAAC CTCCGGACGT ACGTCGAGGG GCCCGACGGT
CCGGGCGTGT ACTTCTACAA CCTCGACGCG GACGACCGGA TCGGCGTCGA ACTCGCGCGG
CGGCTGTTCG CGCTCCCGTA CTACCGCGCG GAGATGGACG TGTCGCACCC CGCGACCGCC
AAGCGCTCCG AAAGCGCGGG TGGCCCCGTT CGGTTCACCA GCCGCCGGGC TCACCCCGGC
GTTCCTCACG CACGGTTCGA CGCGACCTAC GAGCCGACGG GCGAGGCGCT CGCCGCTGAG
CCGGGATCGC TCGACGCGTT CCTCGTCGAG AACTACCGGT TCTATGCCGA GGGGAACCGG
CTGTACCGCG GTGAGATCAC GCACGAGCCG TGGACGCTTC GGGCGGCGAC CGTCGATCTC
CGGGCGAACA CGCTGTTCGA GGCGAACGGG TTCGATCGAC CCGACGGCGA CCCGATCGTC
CGCTACGCGG AGCCGATCGA CGTGAGCGCG GATCGGATTC GATCGGTCTG TTGA
 
Protein sequence
MLERRVLEMT WRDGLFCHWP VDPAVVSGTL PDRLSVATHG GDAYLSVVAF VMDDIRPRGA 
PVGLSFPELN LRTYVEGPDG PGVYFYNLDA DDRIGVELAR RLFALPYYRA EMDVSHPATA
KRSESAGGPV RFTSRRAHPG VPHARFDATY EPTGEALAAE PGSLDAFLVE NYRFYAEGNR
LYRGEITHEP WTLRAATVDL RANTLFEANG FDRPDGDPIV RYAEPIDVSA DRIRSVC