Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1186 |
Symbol | trkA |
ID | 7399453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1192080 |
End bp | 1193417 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643708251 |
Product | potassium transporter peripheral membrane component |
Protein accession | YP_002565850 |
Protein GI | 222479613 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.596494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000028569 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCATGTGG TCATCATCGG GGCCGGCGAG GTCGGGACGA GCATCGCTGC GAGCCTCGCC TCGGACCACG AGGTCGTCGT CATCGATGTC GATCCGGACC GCGCGGACCA GCTCAAGTAC GAGCTCGACG TGCTCACGAT CGCCGGCGAC GGGACCGCCT CGGAGATCCA GACCGCTGCC AATGTCGGCC GCGCGGACAT GGTCATCGCC TGCACGGACA ACGACCAGAC GAACCTCGTC GCGTGCGGGA CCGCGAAAAC GCTCGGTGAC GGGTTCACGA TCGCCCGCGT GAAGAGCACG GACTTCCTCC GGACGTGGGA GGGGAGTGAG GGCGCCTTCG GTGTCGACTT CATGGTGTGT ACCGATCTGT TGACTGCCGA GAACATCGTT CGGGTCATCG GTCTGCCGGC CGCGATCGAC GTCGACCCCT TCGCCAGCGG GCTCGTCCAG ATGGCCGAGT TCGAAATCGA CGAAGAGAGT CCGGTTGCGG GACAGACGGT CTTGGAAGCC GATCGCTTCG AGTCGCTCAC CTTCGTGGGA CTGTTCCGCG ACGGCGAGAT GACGATCCCG CGCGGGGATA CCGGTATCGA GGCCGGCGAT CGCGCGGTGG TGATCGGGAG TCCGGAGAGC GTCCAAGCGT TCGCGACCGA CGTCGCGCCC GATACGACCC CCGGTCGCGC CGACGAGATC GTCGTCGTCG GTGGGACCGA GATCGGGTAT CAGACCGCCC GACTACTCGA AGAACGCGAC TTCAAGCCGC GGCTGATAGA GCGGGAGACC GACCGCGCGC GGTGGCTCGC GGAGAATCTC CCGAATACGG TCGTGATGGA ACACGACGCC ACGGACACCG AGTTTCTCTC CCGCGAGCAT GTCGACGACG CGGACATTCT CGTCACCGCG CTCCAGTCCG ACGAGAAGAA CCTGCTCGTC TCCGTGCTCG CCAAACGGCT CGGGGTCGAC CGCGTTATCG CGGTCGTGGA CAGCCCCGAC TACGTCACCG TCTTCGAGGA GATCGGGATC GATATCGCGA TCAACCCCCG CACCGTGACC GCCGAGGAGA TCACGCGGTT CACCTACGAG AGCGTCGCCG AGAACATTGC CGTGCTCGAA AACGATCAGG CCGAGGTCCT CGAACTCGAA CTCACGGAGG GGTGCGGGCT CACCGGCCGA CCGATCTCGG AGATCGTCGC CGATACCGAC GCGCGGTTCG TCATCGGCGC CATCACCCGC GATCACAAAC TGGTCACCCC CCGCGGAGAC ACCGTGCTCC AAGCCGGTGA CCACGTGATC CTGCTCGTGG AGTCCGACTC CGTGGGCGCG ATCACGTCGA TGGCGTGA
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Protein sequence | MHVVIIGAGE VGTSIAASLA SDHEVVVIDV DPDRADQLKY ELDVLTIAGD GTASEIQTAA NVGRADMVIA CTDNDQTNLV ACGTAKTLGD GFTIARVKST DFLRTWEGSE GAFGVDFMVC TDLLTAENIV RVIGLPAAID VDPFASGLVQ MAEFEIDEES PVAGQTVLEA DRFESLTFVG LFRDGEMTIP RGDTGIEAGD RAVVIGSPES VQAFATDVAP DTTPGRADEI VVVGGTEIGY QTARLLEERD FKPRLIERET DRARWLAENL PNTVVMEHDA TDTEFLSREH VDDADILVTA LQSDEKNLLV SVLAKRLGVD RVIAVVDSPD YVTVFEEIGI DIAINPRTVT AEEITRFTYE SVAENIAVLE NDQAEVLELE LTEGCGLTGR PISEIVADTD ARFVIGAITR DHKLVTPRGD TVLQAGDHVI LLVESDSVGA ITSMA
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