Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1183 |
Symbol | |
ID | 7400992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1188443 |
End bp | 1188883 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643708248 |
Product | UspA domain protein |
Protein accession | YP_002565847 |
Protein GI | 222479610 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000413048 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTCAC TCGACGACGG CGAGGCTACC GACCTGCTCG GTCACGTCCT CCTCCCGATC GCCAACGAAG AGGACGCGCT GTCGACGGCG CGGGCGCTCG AACCGTACGC CCCGGAACGT GTAACGGCAC TACACGTTGT CGAGAAGGGC GGCGGCGTCC CGGACAAGAC GCCCGTCGAG CAGTCGGAGG AGCTGGCGGC GGAGTCGTAC GCCGCGGTCC GGACCGTGTT TCCCGACGCC GGCGACCACA CCGCGTACGA TCGTGACGTG GTCAGCGCGA TCCTCGACGC CGCCGACGAG GTCGGCGCGA CCGCGATCGC CTACCGATCG CGGGACGGGA ACCGCCTCAT GCGGTTCCTC TCCGGCGATC TGTCGGCGAA GCTCGTGACG AACGCGACCG TCCCGGTGAT CGCGCTGCCC CGAGACGACG ACGGCGAGTG A
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Protein sequence | MSSLDDGEAT DLLGHVLLPI ANEEDALSTA RALEPYAPER VTALHVVEKG GGVPDKTPVE QSEELAAESY AAVRTVFPDA GDHTAYDRDV VSAILDAADE VGATAIAYRS RDGNRLMRFL SGDLSAKLVT NATVPVIALP RDDDGE
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