Gene Hlac_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1183 
Symbol 
ID7400992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1188443 
End bp1188883 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content69% 
IMG OID643708248 
ProductUspA domain protein 
Protein accessionYP_002565847 
Protein GI222479610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000413048 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTCAC TCGACGACGG CGAGGCTACC GACCTGCTCG GTCACGTCCT CCTCCCGATC 
GCCAACGAAG AGGACGCGCT GTCGACGGCG CGGGCGCTCG AACCGTACGC CCCGGAACGT
GTAACGGCAC TACACGTTGT CGAGAAGGGC GGCGGCGTCC CGGACAAGAC GCCCGTCGAG
CAGTCGGAGG AGCTGGCGGC GGAGTCGTAC GCCGCGGTCC GGACCGTGTT TCCCGACGCC
GGCGACCACA CCGCGTACGA TCGTGACGTG GTCAGCGCGA TCCTCGACGC CGCCGACGAG
GTCGGCGCGA CCGCGATCGC CTACCGATCG CGGGACGGGA ACCGCCTCAT GCGGTTCCTC
TCCGGCGATC TGTCGGCGAA GCTCGTGACG AACGCGACCG TCCCGGTGAT CGCGCTGCCC
CGAGACGACG ACGGCGAGTG A
 
Protein sequence
MSSLDDGEAT DLLGHVLLPI ANEEDALSTA RALEPYAPER VTALHVVEKG GGVPDKTPVE 
QSEELAAESY AAVRTVFPDA GDHTAYDRDV VSAILDAADE VGATAIAYRS RDGNRLMRFL
SGDLSAKLVT NATVPVIALP RDDDGE