| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1174 |
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| Symbol | |
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| ID | 7400983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1180484 |
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| End bp | 1181593 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643708239 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_002565838 |
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| Protein GI | 222479601 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR01927] o-succinylbenzoic acid (OSB) synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00378756 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGGCTCC GCCCCTTCTC GCTCGCGCTG GCGAGTCCCC TCGAAACGGC GCGCGGCTCC
ATCGATCGGC GCGAGGGATT TCTCGTCGCC GTCGACCCCG GAGCCGACGG CGAGTCGGTT
CCCGCGCCCG GCCTCGGCGA GGCGACGCCG CTCCCCGGCT GGACCGAGTC GCGGTCGGCC
TGCGAGGCGG CGCTTCGCGG GGCCGAAGAC GAGAACGATG GGAAGGCGCT CGCGACGGAT
GCGCTCGACC GACTCGACCC TACCGAGACG CCTGCCGCGC GCCACGGCCT CGCGCTCGCG
CTCGCGGATG CGACCGCTCG CGACGCCGGG CAGTCGCTGG CCGAGCGCCT CGCAGAGAAC
GAGAACCTGC CCGCGCCAAC CGAGACGGTC CCGGTCAACG CGACGATCGG TGACGTCGAC
TCGGAGGACA CCGTCGCCGC GGCCGAGAAC GCGGTCGAGA AGGGATTCGA CTGCCTGAAG
GTGAAGGTCG GCGCGCGCGG CCTCGATGCC GACATCGAGC GCCTTCGAGC CGTTCGACGG
GCAGTCGGCG GCGATGTCTC CCTCCGAGCC GACGCCAACG GTGCGTGGGA CCGGGAGACC
GCCCGGGAGG CGGTCGAGCG ACTTGCACCG CTCGACCTCG CGTACCTCGA ACAGCCGCTG
CCGGCCGACG ACCTCGACGG GGCGGCCGCC CTCAGAACGG TCGGGAGCGG TGTCGATACC
GACACCGACC GCGATCCCCC GGTCCCGATC GCCCTCGACG AGTCGCTCGC GACCCGCGGG
CTCGATGCGG TCCTCGATGC CGACGCCGCC GACGCCGTCG TCTTGAAACC GATGGCGCTC
GGAGGGCCGG ACCGAGCGCT GGCGGCGGCG AGACGGGCGC GGGAGGCCGG CGTCGAGCCG
GTCGTCACCA CCACGATCGA CGCGGTCGTC GCGCGCACCG CCGCGGTCCA CGTCGCCGCC
GCTATCCCAG ACGTATCCCC CTGCGGGCTC GCCACCGGCT CCCTGCTCGA CACGGACCTC
GCTCCGGATC CTTGCCCGAT CTCGGACGGC GCGGTGACGG TGCCGACCGA TCCCGGTCTG
GCCGGCGACG CCTTTGACGA CCTCCTGTAG
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| Protein sequence | MRLRPFSLAL ASPLETARGS IDRREGFLVA VDPGADGESV PAPGLGEATP LPGWTESRSA
CEAALRGAED ENDGKALATD ALDRLDPTET PAARHGLALA LADATARDAG QSLAERLAEN
ENLPAPTETV PVNATIGDVD SEDTVAAAEN AVEKGFDCLK VKVGARGLDA DIERLRAVRR
AVGGDVSLRA DANGAWDRET AREAVERLAP LDLAYLEQPL PADDLDGAAA LRTVGSGVDT
DTDRDPPVPI ALDESLATRG LDAVLDADAA DAVVLKPMAL GGPDRALAAA RRAREAGVEP
VVTTTIDAVV ARTAAVHVAA AIPDVSPCGL ATGSLLDTDL APDPCPISDG AVTVPTDPGL
AGDAFDDLL
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